Oncorhynchus tshawytscha (Chinook salmon): 112250115
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Entry
112250115 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa-like isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112250115
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112250115
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112250115
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112250115
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Type II RPTP family
112250115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
I-set
Tc-R-P
ig
Ig_3
Y_phosphatase3
Ig_2
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
112250115
NCBI-ProteinID:
XP_024275747
LinkDB
All DBs
Position
LG05:complement(19615024..19778774)
Genome browser
AA seq
1483 aa
AA seq
DB search
MDTCRLGFILLYFSILSVGAQFTAAQMGQPVKGGCTFDDGPAQCDYQQDPYDDFDWTHVS
AQEVPYLSSELPQGSYMMVDSSQHDAGEKARIQLPVMKENDTHCIDFNYLLYTQDGSSPG
TLNILVKVNKGPLANPIWNVTSYTGKDWLRAELAVSTFWPNEYQVIFEAEVSDGKTGFIA
IDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDTVNNRLWLQRRNGEDIPVA
STKNINHRRFAASFRLKEVTSLDQDLYRCVTQSERGSGVSNFAGLIVREPPRPIAPPQLL
GVGPTYLLIQLNANSIFGDGPIILKEVEYRMTSGSWIETHAVNSPNYKLWHLDPDTEYEI
RVLLTRPGEGGTGQPGPPLITRTKCAEPMRTPKRLKIAETQARFIAVDWESLGYNITRCH
TFNVTICYRYYNANNQTKADCLDMDPKAPRHVVGNLPPNTNVSLKMILTNPEGRKESDET
IIQTDEDVPGPVPSQSMKATPFEDRIFLYWKEPLEPNGIITQYEIAYSGIRSFDPSVPIM
RPPLIVSLPWNTSHHVFNQLHPGTTYQFIIRASTVKGFGPPTTLNVTTNISAPTLEEYDG
SEAFLNETATTITVLLKPAQAKGAPISAYQIVVEELNPHRTRREASSVDCYQVPVPFHSA
SSGGSSYYFAAELPPGNLPEPSPFTVGDNKTYHGFWNPPLTPRKNYNIYFQAVSSVEKES
KTQCLRLATKGATEEPEVIPDPAKQTDRVVKIAGISAGVLVFILLVLVAILLVKKSHGGF
TTKNWSVRRSYYSYSYYLKLAKKRKDAIGNTRQEMTHMVNAMDRSYADQSTLHTEDPMAV
TFMDSHNFSNRLPNDPLVPTAVLVPITDENHTAAAAESSRLLDVPRYHCEGTESPYQTGQ
LHPAIRVADLLQHINLMKTSDSYGFKEEYESFFEGQSASWDVAKKDTNRTKNRYGNIIAY
DHSRVILQPMEDDPSSDYINANYIDIWLYRDGYQRPSHYIATQGPVHETVYDFWRMVWQE
QSACIVMVTNLVEVGRVKCYKYWPDDAEVYGDFKVTFVEVEPLAEYVVRTFTLERRGFNE
LREVKQFHFTGWPDHGVPYHATGLLSFIRRVKISNPPSAGPIVVHCSAGAGRTGCYIVID
IMLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACLCGETAIPACEYKA
AYYDMIRIDSQSNSSHLKDEFQTLNSVTPQPQPEDCSIALLPRNHEKNRFMDMLPPDRCL
PFLITIDGESSNYINAALMDSYRQPAAFIVTQHPLPNTVKDFWRLVYDYGCTSLVMLNEI
DLAQGCPQYWPEEGTLRYGPVQVECMSCSMDCDVISRLFRICNLTRPQEGYLMVRQFQYL
GWAAHREVPASKRSFLKLILQVDKWQEECEEGEGRTIIHCLNGGGRSGMFCAISIVCEMI
KRQNVVDVFHAVKSLRNSKPNMVDSPDQYRFCYDLALEFIETS
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtgtagacttggcttcatacttctctacttttcaattctaagtgttggtgct
caattcacggcagcgcaaatgggacaaccagtgaagggtggctgtacatttgacgatggc
ccagcccagtgtgactaccagcaggatccctatgacgactttgactggacccatgtcagc
gcacaggaagtgccatacttgtcatctgaactgcctcaaggttcctacatgatggtggac
tcctcccagcacgatgccggagagaaggcacgcattcagctgccagtaatgaaggaaaac
gacacccactgtattgacttcaactacttattgtatactcaagatggctccagcccgggg
accctgaacatcctggtaaaggttaacaaaggtcccctggctaatcccatctggaatgtg
accagctacaccgggaaggactggctccgggctgagctggccgtcagtaccttctggcct
aacgagtatcaggtcatatttgaggcggaggtctcggacgggaagaccggcttcattgcg
attgatgacatccaggttctgagctatccatgtgataaatcgcctcacttcctgcgcctg
ggagatgtggaagtcaacgccgggcagaacgccacattccagtgcatcgccaccggccgg
gataccgtgaacaacaggctgtggctgcagaggagaaatggggaggacattcccgtggcg
tcaactaagaacatcaaccacaggcggttcgctgcctcgtttagactcaaggaagtgact
agtctggaccaagacctttaccgatgtgtcacccagtcagagagaggatctggtgtgtcc
aacttcgctggactcatcgtcagagaacccccgcggcctatcgcacctcctcagctgctg
ggcgtggggcccacctaccttctgatccagctcaatgccaactccatattcggggatggc
cccatcattctaaaggaggtggagtatcgcatgacatcagggagctggatagagacccat
gctgtcaactcccctaactacaagctgtggcacctggacccagacacagagtacgagatc
cgtgtgctgctcaccagaccaggggaggggggcaccggccagcctggaccacctctcatc
accaggacaaagtgtgccgaaccgatgcggaccccgaagagactgaagattgcagagacc
caggccagattcatcgctgtggactgggagtctctgggctacaatatcacccgctgccac
accttcaacgtcaccatctgctaccgttactacaacgccaacaaccagaccaaggccgac
tgccttgacatggaccccaaggccccacgccacgtggtgggtaacctgccccccaacacc
aatgtcagcctcaagatgatcctcaccaaccccgaaggacgcaaggagagcgatgagacc
atcatccagacagatgaagatgtgcctggccccgttccaagccagtccatgaaagccaca
ccgtttgaggatcggatcttcctttactggaaggaaccactggagcccaatgggatcata
actcagtatgagatcgcctacagtggtattcggtcctttgacccctctgtgccaataatg
cgcccccctctgatcgtgtctctgccctggaacacttctcaccacgtcttcaaccagctg
caccctggcaccacctaccagttcatcatacgagccagcaccgtcaagggcttcggcccc
ccgaccacactcaacgtcaccaccaacatctcagccccaacactggaagagtatgatggg
tccgaggcgtttctgaatgaaacggccaccaccatcaccgtcctactgaagcccgctcag
gccaaaggtgcccctatcagcgcttatcagatcgtggtggaggagctgaacccacatcgc
acacgcagggaggccagctccgtggactgctaccaggtcccagtccccttccacagtgcc
tccagtggtggctcgtcttattactttgcggcagaactgccaccagggaaccttcccgaa
ccctctccgttcacggtgggcgacaacaagacgtaccatggcttctggaaccctccactc
acccccaggaagaactataatatctacttccaggccgtcagcagtgtggagaaggaatca
aaaacacaatgtctgagacttgcaacaaaaggagctacagaggaaccagaggtgatcccg
gacccagccaagcagacagacagggtggtgaagattgctggcatcagtgctggggtgctg
gttttcatcctactggtgctggtggccatccttctggtcaagaagagtcatggaggcttt
actacgaagaattggtcagtcaggaggagctactattcttactcatattacctgaaactg
gccaagaagcgcaaagatgccattgggaatactcgtcaggaaatgacccacatggtgaat
gccatggaccgcagttatgctgatcagagcacgctccacactgaggatcccatggccgtc
acattcatggactcccacaacttcagcaacagattgcctaatgatccacttgtgccaacg
gcagtgctagtgccaattaccgatgagaaccacactgcagctgctgcagagtccagtcgg
ctgctggacgtccctcggtaccactgtgaggggacagagtcgccctaccagaccggtcag
ctgcacccagccatcagggtggctgacctgctccaacacataaacctgatgaagacctct
gacagctacggcttcaaggaggaatatgagagtttttttgaaggccagtccgcttcctgg
gacgtggcaaagaaagacactaacagaaccaagaaccgctatggaaacatcattgcatac
gatcattctagagtgatcctgcaaccaatggaagacgacccttcctctgactacatcaac
gccaactacattgacatatggctgtacagggatgggtatcagaggccaagtcattacatt
gcaactcaagggcctgtccatgagacagtctatgatttctggaggatggtctggcaagag
cagtctgcctgtatcgtcatggtcaccaacctcgtggaagttggacgggtgaagtgttac
aagtactggcccgatgatgctgaggtctatggtgatttcaaagtgacgtttgtggaagtg
gagccccttgctgaatatgtggtcagaacgttcaccttggagaggagaggctttaatgag
ctgcgcgaggtgaagcagtttcatttcaccggctggcctgaccacggagtgccctaccac
gccacgggccttctctccttcatccgccgggtcaagatttccaacccccccagcgctggg
cccatcgtggtgcactgcagcgccggagccggacgcacaggctgttacatcgtcatcgac
atcatgctggacatggcggagagggagggcgtggtggacatctacaactgtgtgaaggct
ctgcgctccagacgcatcaacatggtacagactgaggagcagtacatcttcatccatgac
gccatcctagaagcctgtctgtgtggcgagacggccatccctgcctgcgagtacaaagca
gcttactacgacatgatcaggatagactcacagagcaactcctcacacctcaaagatgaa
ttccagacactgaactcggtgacccctcagccccagccagaggactgcagcatcgccctg
ctccccaggaaccacgagaagaaccgcttcatggacatgctgcctccagaccgctgtctg
cccttcctcatcactatcgacggggagagcagtaactacatcaacgctgccctcatggat
agctacagacagccagcagccttcatcgtcacccagcaccctctgcccaacacagtcaag
gacttctggaggctggtgtatgactacggctgcacttccctggtgatgctcaacgagatt
gacctagcgcagggctgccctcagtactggcctgaagaggggacgcttcgctacggtcct
gtccaagttgaatgcatgtcctgctccatggattgtgatgtcatcagccgtctcttcaga
atatgtaacctcactagacctcaggagggctatctgatggtgaggcagttccagtacctg
ggctgggcagcccacagagaagtcccagcgtcaaagcgttccttcctgaagctcatactg
caggtggacaagtggcaggaggagtgtgaagagggagagggacgcacaatcatccactgc
ctaaacggaggcgggcgcagtgggatgttctgtgctatcagcattgtgtgtgagatgatc
aagaggcagaatgtggtggacgtgtttcacgcagtcaagagcctgaggaacagcaagccc
aacatggtggacagcccggatcagtaccgcttctgctacgaccttgctctggagttcatc
gagacctcttaa
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integrated database retrieval system
