Oncorhynchus tshawytscha (Chinook salmon): 112250214
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Entry
112250214 CDS
T05605
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112250214
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112250214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112250214
04090 CD molecules [BR:
otw04090
]
112250214
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Nectin family
112250214
CD molecules [BR:
otw04090
]
Proteins
112250214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
Ig_2
I-set
DUF6022
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
112250214
NCBI-ProteinID:
XP_024275933
UniProt:
A0A8C8GNW2
LinkDB
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Position
LG30:complement(15980097..16051412)
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AA seq
569 aa
AA seq
DB search
MEDGSTFKMFLPCLRNYPLYKGQHAVFIVLLYILTGVGCSQVLVPQKVSAVLGKNVTLGC
SVEVGANLSLTQSSWERRLPTGSVTVAVYNPVFGISIPPNYVRRLSFRSPSSHDATIVLE
DVGFEDIGVYTCKVATFPLGNTQASTTVSVLVEPRVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVSLQDEANGTTSTQVRYLWQPTRHIQGHALTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWYVGRENIQLTCKANANPPAHHFTWIRLDGKMPEGV
EIVNNTLLFLRPLQWNDSGVYRCEVANDINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGS
ASSSTSVGDKRRVFTSPTLAALPPDNHLGTIVGGAVGGALFLLLLLVVGGVCYLRQRQTF
RGDYYTKQYLGPSDMQKAPPQHELHPTKPENNVYLDKDREEWGDRERNHVRDRERLHLHP
TSTTIINNQREPEYQPNGLTRAMRNGDHHDHLRSYPSPHQTGHARYAAPSHPLSTGSPYL
SDDCYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggctctactttcaaaatgttcctgccttgcctaaggaattacccgctttac
aaaggacagcatgctgtatttattgttcttctgtacatcttgacaggtgtggggtgcagt
caggtgttggttccccagaaggtgagtgctgtattggggaagaatgtgacgttgggctgt
agcgtggaggtgggggccaacctcagtcttacccagagttcctgggagcgccggctcccc
acaggctcggtgactgtggcggtgtacaatcccgtgttcggcatctcgatccccccaaac
tatgtgcgccgcctgtccttccgctcgccctcctcccatgacgccaccatcgtactggag
gatgtgggctttgaggacattggagtgtacacctgcaaggtggccaccttccccctgggc
aacacacaggcctccaccactgtcagcgtgctcgtggagcccagggtgtatgtgtcggct
ggctcggtagctctgatcgacgagggcaatgaaacagtggtggccacctgcattgctgag
cgggcccgcccccccgccgaagtctcttgggagactgacctgtttggccaatcagaggtg
tcgctacaggacgaggcaaacggcacgaccagcacccaggtgcgctacctgtggcagccc
acccgccacatccagggtcacgccctcacctgtgtggtgcgtcatcctgccttgcacaca
gacttcaggatcccctaccagctcaacgtgcagtacgccccagacatcgtggtcgtaggt
tatgacggtgactggtacgtgggccgtgagaacatccaactgacctgcaaagccaacgca
aacccaccagcacaccacttcacatggatcagactggacgggaaaatgccagaaggggtg
gagatagtgaacaacacgttgctgtttctgaggcccctccaatggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgaggatacgcata
caagatcctcccaccacctccatgccctccaccacccctgcgcctgtcctaaccggctct
gcctcctcatccacctctgtgggagacaagcgacgggtcttcacctcccccaccctggca
gccctgccccccgacaaccacctgggcaccattgtgggcggggctgtgggcggagccttg
ttcctccttctgctgctggtagtgggcggggtctgttacctacgacaacgacagaccttc
cgcggggactactacactaagcagtacctagggccttcagacatgcagaaggctcctcca
cagcacgagctccaccctactaagcctgaaaataacgtctacctagacaaggaccgcgaa
gagtggggcgaccgcgaacgcaaccacgtgcgggaccgtgaacgcctccacctgcatcca
acatcaacaaccatcataaacaaccaaagagaaccggagtaccagcccaacggcctcacg
agggcgatgaggaacggagaccaccatgaccacctgcgtagctaccccagcccacaccag
acaggccatgctagatacgctgccccgtcacacccactgagcactggctccccctacctg
tcggatgactgctatgacagcggcgctgagggggactatgtctcccatatggacggctca
gtgatctcacgcagggagtggtacgtctga
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