Oncorhynchus tshawytscha (Chinook salmon): 112250226
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Entry
112250226 CDS
T05605
Name
(RefSeq) charged multivesicular body protein 1b
KO
K12197
charged multivesicular body protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112250226
09143 Cell growth and death
04217 Necroptosis
112250226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112250226
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
112250226
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112250226
Exosomal proteins of other body fluids (saliva and urine)
112250226
Exosomal proteins of colorectal cancer cells
112250226
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Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
Mt_ATP-synt_D
DUF948
hGDE_central
Motif
Other DBs
NCBI-GeneID:
112250226
NCBI-ProteinID:
XP_024275956
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All DBs
Position
LG30:15708406..15711602
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AA seq
199 aa
AA seq
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MSNMEKHLFNLKFAAKELQRSSKKCDKEEKAEKAKVKKAIQKGNVEVARIHAENAIRQKN
QSVNFLRMSARIDAVAARVQTAVTMNKVTKSMAGVVKGMDATLKSMNLEKISGLMDKFEH
QFETLDVQTAQMEDTMSSTTTLTTPQNQVDSLMHELADEAGLDLNMELPQGQTGSVGTSV
ASAEQDELSSRLAKLRDQM
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatatggagaagcatctctttaatctcaagtttgcagccaaagaactgcaacga
agctctaagaaatgtgacaaagaggaaaaggcagagaaggccaaagtcaaaaaagctatc
caaaaaggaaatgtggaagtggcacggatccatgcggaaaacgccatcagacagaagaac
cagtcggtcaacttcctaaggatgagtgctaggattgatgcagtggccgccagggtccaa
acagcagtcacaatgaacaaggtcactaaatctatggctggagtggtgaaaggcatggat
gccacactgaagagtatgaacctggagaagatctctgggctcatggacaagtttgagcat
caatttgagacgttagatgtacagaccgctcaaatggaggacaccatgagtagcacaacc
acactaaccaccccacagaatcaagtggattcactgatgcacgaattggctgatgaagca
gggttggacctgaacatggaactcccacagggacagactggatcagtgggcaccagtgta
gcgtcagcagagcaggatgagctgtcttcaaggcttgccaaactccgagaccaaatgtaa
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