Oncorhynchus tshawytscha (Chinook salmon): 112250238
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Entry
112250238 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 9-like isoform X1
KO
K20686
Rho guanine nucleotide exchange factor 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250238
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112250238
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SH3_3
Motif
Other DBs
NCBI-GeneID:
112250238
NCBI-ProteinID:
XP_024275977
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Position
LG30:15161103..15180728
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AA seq
555 aa
AA seq
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MMMRMMMLISGGSIVSAEAVWDHVTMADRELAFKAGDVIKVLDASNKDWWWGQIDDEEGW
FPASFVRVEPHLPQPQTKQVFYINPIAAPRFQNTTSKLWVNQEENTAVETVEGASPSPSE
VQNGHADASPSSSDCLCQPAQDRDQMRANIINEIMSTERHYIKHLKDICEGYFRQCKKRR
DMFNDDQLRVIFGNIEDIYRFQMGFVRDLEKQYNTEEPHLSEIGPCFLEHQDGFWIYSEY
CNNHVDACMELSRLMKDGRYQQFFEACRLVQQMIDIAIDGFLLTPVQKICKYPLQLAELL
KYTVQEHSDYRYVAAALAVMRNVTQQINERKRRLENIEKIAQWQASVLDWEGDDILDRSS
ELVYTGEMSWIYQPYGRSQTRVFFLFDHQMVLCKKDLIRRDILYYKGRINMDRYNVVDAV
DGRDDDFNVSVKNAFKLSNKDSDEIHIFLAKKLEEKLRWLRGFHEERKMVQEDEKIGFEI
SEYQKRQAAMTVRRMTKQKGHRSVPPGYPPPMDPMNPGQYLVGDSMEQSEFEFPEPERCK
SPFWQSFSRLTPFRK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaggatgatgatgttgatcagtggaggatccatcgtcagcgctgaggcagta
tgggatcatgtcaccatggccgacagggagttggcatttaaggcgggggatgtaatcaag
gtcctcgatgcatcaaataaggactggtggtggggacagattgacgatgaagaaggatgg
ttcccagccagctttgtgagggttgaaccccacctaccacaacctcaaacaaaacaggtt
ttctatatcaaccctatagcagctccaaggttccaaaacacaacttccaagctgtgggtg
aaccaggaggagaacacggcggtagagacagttgaaggagctagccccagccccagtgag
gtccagaacggccatgcagatgccagccccagcagcagcgactgcctgtgccagcctgcc
caggacagagaccagatgagggccaacataatcaatgagattatgagcacagagcgtcac
tacatcaaacacctgaaggacatatgtgagggttacttccggcaatgtaaaaaaagaaga
gacatgttcaacgacgaccagttgagggtcatatttgggaacattgaagatatctataga
tttcaaatgggctttgtcagagacctggagaagcagtacaatacagaagaacctcatctc
agtgaaataggtccctgcttcctagagcatcaagatggcttttggatatattcggagtac
tgcaacaaccacgtggatgcctgcatggagctctctcgactgatgaaggatggccgctat
cagcaattcttcgaggcatgtcgcctggtgcagcagatgattgacatcgccattgacggt
ttcctgctcacgcccgtccaaaagatctgcaagtaccctctgcagctggcagagctgctc
aagtacactgtccaggagcacagtgactaccgttatgtcgctgcagcgctggccgtaatg
aggaatgtcactcagcagattaacgagcggaagcgtcgcctggaaaacattgagaagata
gcacagtggcaggcgtctgtgctggactgggagggggatgatattctagacaggagttca
gagctggtctacactggggagatgtcatggatctaccagccgtatgggcggagtcagact
agggtcttcttcctgttcgaccatcagatggttctgtgtaaaaaggacttgatacgacga
gacattctgtactacaagggccgcatcaatatggacaggtacaatgtagtcgatgccgta
gatgggcgggatgatgacttcaacgtgagtgtgaagaacgcgttcaagctgagtaataag
gactcagacgagatccacatcttcctggccaagaagctggaggagaaacttcgctggctc
agaggtttccatgaggaacgcaagatggtgcaagaggatgaaaaaatagggtttgagata
tcagagtatcagaagcggcaagctgcaatgacagtgcgaagaatgaccaaacagaaaggc
cataggtctgtgccccctggatacccccctcctatggaccccatgaatccaggacagtac
ttagttggagacagcatggaacaatcagaatttgaattccctgaacctgaaaggtgcaag
tctcccttctggcagagcttcagcaggttaaccccctttaggaaatag
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