Oncorhynchus tshawytscha (Chinook salmon): 112250254
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Entry
112250254 CDS
T05605
Name
(RefSeq) ectodysplasin-A-like isoform X1
KO
K05480
ectodysplasin-A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112250254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112250254
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Tumor necrosis fators
112250254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
TNF
Motif
Other DBs
NCBI-GeneID:
112250254
NCBI-ProteinID:
XP_024276000
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All DBs
Position
LG30:complement(14186432..14250890)
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AA seq
367 aa
AA seq
DB search
MAPKSMSEKFAHIEEIELKETTCICRKHCNNCKIFLGFFVLSLSLHLVTLFCYLDLRSEV
KREILQKNREETVSPAADDMNDRYSPVFQLLDISYPTDLQPQNRLPLGNSGENSHLTEDR
ENAVHRTKRSQQNKRLDSESHGNKRKERKKGKKGPPGAPGPPGPPGPQGPPGIPGIPGIP
GNNAMGPSGPPGPPGPAGPPGPQGPPGLQGPSGGRVRDSQPAVVHLQGQETTIQVKEDLS
EGVLRNWKMISMHHKVFKMHSRSGELEVLVDGTYFIYSQVEVYYLNFTDIASYEVMVDKT
PFLRCTRSIETGQRKFNTCYTAGVCLLRARQKISIRMVYEDTSISMTNHTTFLGSIRLGE
APSASHS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcacctaaatctatgtctgaaaagtttgcacacatagaggagattgaattgaaagag
actacttgcatttgcaggaaacattgtaataactgtaaaatcttcctgggattcttcgtc
ttatccctttcattgcatctagtaacgcttttctgttatttggacctgagatcggaggtg
aaacgcgagattctccagaagaacagagaggagacagtgtcaccggccgcagacgatatg
aatgaccgatattctccagtattccagctgttggatatcagctacccaactgatctacag
ccacagaatagattgcctctggggaacagtggggaaaactctcacctcacagaagacaga
gaaaatgccgtccatcgcaccaaaaggagccagcagaataaacgacttgattcagaatca
catggaaacaaacggaaagaaaggaagaaaggcaagaaaggccctccgggtgcacctggc
cccccaggccctccagggccacaggggccaccaggtattcctggcatcccaggtatccct
gggaacaacgccatgggtccctcaggaccacccggaccgccaggccctgctggaccccca
gggccacagggaccccctggtcttcaaggaccctcagggggcagagtcagagatagccag
cctgctgtggtacatctccaaggccaggaaacaacaatacaggtcaaggaagatctttca
gaaggcgtactgagaaactggaaaatgatatccatgcatcacaaggtgttcaagatgcac
tcgcggtctggggagctggaggtgctggtagatggtacctacttcatctatagtcaggta
gaagtttactacctcaacttcactgacattgctagctatgaggtgatggtggacaagacg
ccgttcctgcgctgtacacggagcatcgagactggacagcgaaagttcaacacctgctac
acggctggggtgtgtctgctgcgtgcccggcagaagatctccatcaggatggtgtacgag
gacacctccattagcatgaccaaccacaccaccttcctggggagcatccgacttggggag
gccccctcagccagccactcctga
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