Oncorhynchus tshawytscha (Chinook salmon): 112250383
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Entry
112250383 CDS
T05605
Name
(RefSeq) DNA repair protein RAD51 homolog A
KO
K04482
DNA repair protein RAD51
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03440
Homologous recombination
otw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112250383
03460 Fanconi anemia pathway
112250383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250383
04121 Ubiquitin system [BR:
otw04121
]
112250383
03400 DNA repair and recombination proteins [BR:
otw03400
]
112250383
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112250383
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112250383
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
112250383
RecA family proteins
112250383
FA (Fanconi anemia) pathway
Other FA pathway factors
112250383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
AAA_22
HHH
AF1548-like_C
PAXNEB
Motif
Other DBs
NCBI-GeneID:
112250383
NCBI-ProteinID:
XP_024276241
LinkDB
All DBs
Position
LG05:25933859..25937658
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AA seq
340 aa
AA seq
DB search
MAVRSEARVEAEAEVEEEESFGPQLLSRLEQCGISASDIKKLEDAGFHTIEAVAYAPKKE
LLNIKGISEAKADKVLAEAAKLVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIET
GSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYG
LVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELA
ARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNIMAHASTTR
LYLRKGRGETRICKIYDSPCLPESEAMFAINADGVGDAKD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgagaagcgaggccagagtggaggcagaggcagaggtagaggaggaggagagc
tttggaccacagctactgagtagacttgagcaatgtggcatcagtgccagtgacataaag
aagctggaggatgcaggcttccacaccattgaggcagtggcctatgcccccaagaaggag
ctgcttaacatcaaggggatcagtgaggccaaagcagacaaagttctggctgaagctgcc
aaactagtgcccatgggcttcaccacagcaacagagttccaccaacgccgagctgaaatc
atccagatctccactgggtccaaagagctggacaagctgctacagggtgggatagagaca
ggctccatcacagaaatgtttggagagttccggacaggaaaaacacagctgtgccacacc
cttgcagtcacctgccagttgcccattgaccagggtggtggagagggaaaagccatgtac
attgatacagaggggaccttcagaccagagaggttactggctgtagcagagcggtatgga
cttgttgggagtgacgttctggacaatgtagcctacgctagggcctttaacacagaccac
cagacccagctgctttaccaagcctcagccatgatggcagagtccaggtatgccctgctg
atagtggacagtgccacagccctctacagaaccgactactccgggaggggagagctcgct
gcacggcaaggccacctgggacgcttcctgagaatgctgctaaggctagcagacgagttt
ggcgttgctgtggtgataaccaatcaggtggtggcccaggtagacggtgccgccatgttc
tcagcagaccctaaaaaacctatcgggggcaacatcatggcacatgcctccactacgcga
ctgtacttgaggaaaggccgtggcgaaacgaggatctgcaaaatctacgactcgccctgc
ctccctgagtctgaagccatgtttgccatcaacgcagatggggtgggtgatgccaaggac
tga
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