Oncorhynchus tshawytscha (Chinook salmon): 112250400
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Entry
112250400 CDS
T05605
Name
(RefSeq) clathrin coat assembly protein AP180 isoform X1
KO
K20043
clathrin coat assembly protein AP180
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250400
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112250400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
ENTH
Motif
Other DBs
NCBI-GeneID:
112250400
NCBI-ProteinID:
XP_024276271
LinkDB
All DBs
Position
LG05:26568404..26610675
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AA seq
724 aa
AA seq
DB search
MSGQTLTDRIAAAQYQLTGSEVSRAVCKATTHEVMAPKKKHLEYLISATNATNVNIPQMA
DTLFERATNASWIVVFKALVTTHHMCVHGNERFIQYLASRTALFNLSNFIDKTGSHGYDM
STFIRRYGRYLNERAFAYRQMAFDFTKVKKGAEGVMRTMAPDKLLKGMPVLQTQIDTLLE
FDVHPKELNNPIINAAFLLLFKDLVKLFASYNDGVINLLEKYFKMKKSDCKEALEIYKRF
LTRVTKIGEFMKLAETVGVEKNDIPDINYAPSSILESLETHMNSLEGKKGEGSPTKGSPT
NNVSPTSTPAKSAAAVPTLVPPPEEATDSLLDLDPLSSSGPSAGASAAPMSWGDLLGSEM
GESMLPDPTLAVDTAPSPAGVTPTPVAAEPGVTLAPPPSAAATTSSGATNMDLLGDAFST
PAPASDASAEGGAPAPTPTPAADAAADPFAPTGSSSNAVGPGLDLFAMMPMENNCFNSVA
PPPAPSSTIAAPIPPTTPSIDLFSAMFDSMPDPSLTKADPAPSGDMFGADAFSSPAPFLS
SDPPTDKGAIMDMFGDSTSGETQPAAPAAASGAELMAAFDGLGDVLMPAMTPQTGAASSP
VKHMGGDLDATMANMASNLGMGSQKTGENTMGSGGWSTPQVAPPSWGAPMNVPMGSPSFM
GSYQGFSMGGAAGAGAPMMPMVRPGFGAPAAPGAPMGSPGMAGSPRRPPPPKNALDDLNI
KDFM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagacgctcacggatcgtattgccgctgcgcagtaccagttgacgggatca
gaggtatctcgcgccgtctgcaaagccaccactcacgaggtgatggcgcccaagaaaaag
cacctggaatatctgatatcggctaccaatgcgaccaacgtgaacatccctcagatggcc
gacactctgtttgagagggccaccaacgccagctggattgtcgtcttcaaggccctagtc
accacacaccacatgtgtgtccatggaaacgagaggttcatccaatacctggcctccagg
accgctctgttcaacctcagcaactttatcgacaaaacaggctcccacggctatgacatg
tctacattcatcagacgttacggccgctacctcaatgagagggcctttgcctatcgccag
atggctttcgacttcaccaaagtcaagaagggtgctgaaggggtgatgaggacaatggct
ccagacaagctgttaaaaggcatgcccgtcctgcagacccagatcgacacactgctggag
tttgatgtccaccccaaggagctgaataaccctatcatcaacgcagcgttcctgctgctc
ttcaaggatctggtcaagctgtttgcctcctacaacgatggggtcatcaatctattagag
aaatactttaagatgaagaagagcgactgcaaggaggccttggagatctataagaggttc
ctgaccagggtcaccaagattggagagttcatgaagctcgctgagacagttggtgtcgaa
aaaaatgacattccagacatcaactatgctcccagtagcatcctggagtctctggagaca
cacatgaacagcttggaggggaagaagggtgaagggtctccaacaaaggggtcccccacc
aataacgtgtccccgacctccacccccgccaaatctgcagccgccgtgcccaccctagtg
ccgccacccgaagaagccactgattctctgttggatctggaccctctgtcctcctctggt
ccatcagcaggagcctcagcagcccctatgtcctggggagacctccttggatcagaaatg
ggcgagtccatgcttcctgaccccaccctcgctgtagacaccgctccctctcccgcgggg
gtaacgcccacccctgtagccgcagagccaggagtcactctggctcctccccctagtgcg
gccgccaccacctcctccggtgcgacgaatatggatctgctgggagatgcgttttcgacc
cctgctcccgcctctgatgcctctgccgaaggcggggctccagcccccacgccaacccca
gctgccgacgctgcagccgacccctttgcccccactggtagcagctcaaatgcagtaggc
ccagggctggacctgtttgccatgatgccaatggagaacaactgctttaactcagtggcg
ccccctcctgccccctcatccaccatcgcagcacccatcccccccaccaccccatcgata
gacctcttcagtgctatgtttgattcaatgccagatccaagcctcaccaaagcagaccct
gcccccagtggtgacatgtttggagcagatgcattctcctcccctgcccccttcctctcc
tcagaccccccaactgacaagggggcgatcatggacatgtttggggactccaccagtgga
gaaacccaacctgctgcacctgcagctgcctctggtgctgagctgatggcagcgtttgat
ggtctaggggatgtgttgatgcctgccatgacgccccagactggggccgcctcatctcca
gttaaacatatgggaggggacctagacgccaccatggctaacatggctagcaatctggga
atggggagccaaaaaacgggggagaacacgatgggaagtggaggctggtcaactcctcag
gtagctcctccaagttggggcgctcccatgaacgttccaatgggatccccttcttttatg
gggtcttaccaaggattcagcatgggcggggcggccggcgctggagctcccatgatgccc
atggttaggccaggctttggagcccctgcagccccaggagcaccgatgggatctccaggg
atggccgggagcccgaggaggcctccgccccccaagaatgccctggatgacctcaacatc
aaggacttcatgtaa
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