Oncorhynchus tshawytscha (Chinook salmon): 112250429
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Entry
112250429 CDS
T05605
Symbol
jag2b
Name
(RefSeq) protein jagged-2b isoform X1
KO
K21635
jagged-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112250429 (jag2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
DSL
EGF_2
JAG1
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
DUF6479
Motif
Other DBs
NCBI-GeneID:
112250429
NCBI-ProteinID:
XP_024276327
UniProt:
A0A8C8BSV7
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All DBs
Position
LG05:27958545..28063503
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AA seq
1260 aa
AA seq
DB search
MWNCTRITNCLSILCLLLTIWTEVSKCSGYFELQLITVQNVNGELSDGECCDGTRNSQDL
RCSRDECDTYLKICLKEYQTEVTTTGSCTYGVGSTHVLGGNIFSFKNTKNNQNKINDAGK
VLISFQYAWPRAYSLIVEAWDWDNSTRNNDEELLIERSIHTGMINPGDHWQTIQHDGPVA
RLEYRIRLKCDENYYGSKCNKQCRPRDDYFGHYRCEQSGNRVCLEGWMGEDCQTAICKQG
CNLLHGDCSVPGECKCNYGWQGQFCDECVPYPGCVHGTCVIPWQCSCERNWGGLLCDKDL
NYCGRHQPCVNGGTCMNTEPDEYRCACPDGYSGKTCEIAEHACVSDPCANSGTCHEVPSG
FECHCPPGWEGPTCANDMDECASSPCAQGGTCIDLENGFECVCPPQWGGKTCQIDANECV
GKPCVNAYSCKNLIGGYHCDCFQGWSGQNCDINVKGCHGQCQNGATCKEGPRGYLCQCLS
GFVGTHCEIQRNRCASGPCQNGGRCHSVLDGFVCECPTKFSGELCEVPGWSPSDPCEPTP
CENEAPCHTLTGDFYCACPDGYEGKTCAHLRDHCRTTPCQVIDSCTIVVATNDSADEGGF
RHISSNVCGPRGRCISQPRGNFTCFCDSGFSGTYCHENVNDCVSSPCRNGGTCIDGVNSF
QCFCPDGWEGRLCDLNVNECNRNPCKNGGFCVDLVNDFYCECTNNWKGKTCHSRESQCDA
NTCSNGGTCYDHGDAFRCACPPGRGGSTCNTAKNSMCVSSPCSNGGTCVGGGDSFTCICK
EGWEGPTCSQNTNDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAY
GATCVDEINGFRCVCPLGRTGPQCQEFIGIGKSCHYAGLQFLHGSRWEEECNNCHCVDGK
VECTKVLCGRRLCLLPGSSKSTGEECAQAGPGGRECQEHSYLACFSPPCHRWGVCSSSSG
SGETAPHDHTKCQPNSGHLDNSCARITLIFNRAKVPVGTTVENICSELRYLPATRSLAKD
HALLVLCDLSYTNQDAVEVAISFQPDEQPDHSLIQEAASTIVGTLSKRHNSTVMLAVIEV
KVETQVMPPTVDYLVPILCVVFCVLWLFCIIVCVWWTRKRRKERERRVRGPIDESVNNQW
EPLRPVGGRQQQPQLKDNNEAQQERKKLMGSPYRMRDGGEEEEEEETEGEMEFEEEDVEA
EAGKGPVCKYSKTGVQSKGDVICTLRSLPLKTPIRTTTKDNLWKNVNASLAGQDVKDHFV
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtacaaggattacgaattgcctctcaatactgtgcctcctattgacgata
tggacggaggtgtccaagtgctctggctattttgagctgcaactgattaccgttcagaat
gtgaacggtgagttgtcggacggggaatgctgcgacggcacaaggaactcacaggatctg
cgctgtagccgggacgagtgtgatacttacttaaaaatttgcttaaaggagtaccaaacc
gaggtcacaaccactggctcttgcacctacggagttggatctacacacgttcttggtgga
aatattttttcttttaagaatacgaagaataaccaaaacaaaatcaacgatgctggcaag
gttctcatctcttttcagtacgcatggccgcgggcgtactccctcatcgtggaggcctgg
gactgggacaactccacccgcaacaatgacgaggagctgctgattgagcggagcatccac
acgggcatgatcaaccctggcgaccactggcagaccatccagcacgatgggcccgtggcg
cgcctcgagtaccgcatccgtctcaagtgtgacgagaactactacggcagcaagtgcaac
aagcagtgccggccacgtgacgactacttcggccactaccgctgcgagcagtccggcaac
cgcgtgtgcctggagggctggatgggcgaagactgccagacggcgatctgcaagcaaggc
tgcaacctgttacatggagactgctcagtcccgggggaatgcaagtgcaactatggctgg
cagggccagttctgtgacgagtgtgtcccctacccaggctgtgttcatgggacctgtgtc
ataccctggcaatgtagctgtgagcgcaactggggaggcctgctgtgtgacaaagatctg
aattactgtggcagacaccagccgtgcgtgaacggcggcacctgcatgaacacggagccg
gatgagtatcgttgtgcctgtcccgacggctactctggcaagacctgcgagatagctgag
cacgcctgtgtgtccgacccgtgtgccaacagcggcacgtgccacgaggtcccttctggt
ttcgagtgccactgccctccggggtgggaggggcccacctgcgccaacgacatggacgaa
tgtgcgtccagtccttgtgcccagggcgggacatgcatcgatctggagaacggctttgag
tgtgtgtgccccccacagtggggtgggaagacctgccagatcgatgcgaatgagtgtgtg
gggaaaccgtgtgtaaacgcttactcttgcaaaaacttaattggcggatatcactgcgac
tgctttcaaggatggtctggacaaaactgtgacatcaatgtcaagggctgccacggccaa
tgtcagaatggagcgacgtgtaaggaagggcccagggggtacctctgtcagtgcctgtca
ggctttgtgggcacgcactgcgagatccagcggaacaggtgtgccagtgggccctgccag
aacggtgggcgctgccacagcgttttggacggctttgtgtgcgagtgcccgaccaaattc
tccggggaactgtgtgaggtcccaggttggtctccttcagacccgtgtgagccaaccccc
tgtgagaacgaggcaccgtgccacaccctaacgggtgacttttactgcgcctgtcccgat
ggctacgagggcaagacctgtgcccacctcagggaccactgcaggaccaccccctgccaa
gtaattgacagctgcaccattgtcgtggcgaccaatgactccgcggacgagggtggcttt
cgtcacatctcgtccaacgtttgtggcccccggggacgctgtatcagccagccccgcggc
aacttcacctgcttctgtgactccggcttcagcggcacctattgccacgaaaacgtgaac
gactgtgtgagtagcccgtgtcggaacggaggcacctgcatcgatggtgtcaactccttc
cagtgcttctgtcctgatgggtgggagggccggctctgtgaccttaatgtaaacgagtgc
aaccgtaacccatgtaagaatggtggcttctgtgtggatctggtcaacgacttctactgc
gagtgtaccaacaactggaagggcaagacctgccactcccgtgagagtcaatgtgacgcc
aacacctgcagtaacgggggcacctgctatgaccacggggacgctttccgctgtgcctgc
ccccctgggaggggcggcagtacctgtaacacagccaagaacagcatgtgtgtgtccagc
ccctgctccaacggaggcacctgtgtgggaggcggcgactccttcacctgcatctgcaaa
gagggctgggagggccccacctgctcccaaaacaccaacgactgtaaccctcacccctgc
tacaacggtggtatctgtgtggacggtgtcaactggtttcgatgcgagtgtgcccccggg
ttcgccggaccggactgtcgtatcaatatagatgagtgccagtcgtctccctgtgcgtac
ggtgccacctgcgtggatgagatcaatggcttccgctgcgtctgcccactggggcgaacg
ggcccacagtgccaagagtttatcggtatcgggaagagctgccactatgccggcctgcag
ttccttcatggcagtcgatgggaagaggagtgcaacaactgccactgtgtcgatggcaaa
gtggagtgtaccaaggtcctctgcggacggcggctgtgccttctcccagggtcatcaaag
tcaacgggtgaggaatgtgcccaggcgggcccaggtgggcgtgagtgccaggagcacagc
tacctcgcctgcttctcgcccccctgccatcgttggggggtgtgctcatcctcctccggc
agtggtgagaccgcaccccacgaccacaccaagtgccagcccaacagtgggcacctggac
aacagctgtgcccgcatcacgctcatcttcaaccgggccaaagtgccagtgggcacgacg
gtggagaacatctgttcagagctgagatacctgcctgccacccgatccctggccaaagac
cacgccctccttgtgctctgtgacctctcatacaccaatcaggatgctgtagaagttgcc
atatcgttccagccagatgagcagcctgaccacagtctgatccaagaggcggccagcacc
attgtgggcacgctgtctaagcgtcacaacagcacagtcatgctggctgtcattgaggtc
aaagtggaaacgcaggtcatgccccccacagtggactacctagtgcccattctgtgtgtg
gtcttctgtgtactctggctcttctgcatcattgtgtgcgtgtggtggacacgcaagcgg
agaaaagagcgcgagaggagggtgcgcggccccatcgacgagagcgtcaacaaccagtgg
gagcccctgcggcccgttggaggacgtcaacaacaaccgcagctcaaagacaacaatgag
gcccaacaggagcgcaaaaagctcatgggctccccctacaggatgcgtgatggaggggag
gaagaggaggaggaggagacagagggagagatggagttcgaggaggaggacgtagaagcg
gaagcaggcaaggggcccgtctgtaagtactctaaaaccggagtgcagtccaaaggggat
gtgatctgcactttgcggagtttgcccttaaaaacacccatccggaccaccaccaaagac
aacctctggaaaaatgtcaacgcctccctggctggccaagacgtcaaagaccattttgta
tga
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