Oncorhynchus tshawytscha (Chinook salmon): 112250431
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Entry
112250431 CDS
T05605
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112250431 (brf1b)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
112250431 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Cas12f1-like_TNB
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
112250431
NCBI-ProteinID:
XP_024276334
UniProt:
A0A8C8EGB0
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All DBs
Position
LG05:complement(28291138..28417495)
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AA seq
705 aa
AA seq
DB search
MTSRICKNCGCSEIDLDQARGNAVCTNCGSVLEDNIIVSEVQFVEGSGGISSAVGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINSPA
IDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKDVIGVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQRK
VKMQALEQELAKKLDEVQGEISLYRDEIETELENSRPKLRGIYAAYAKEIDPLDEVLSQA
SCSSPREVDPEEDEELEAVAQHLNQDFLCQVIHGEQQGDERGGEGVTEEAPPPHPPPRGG
PSLASILGPLPSAASLGLSESIHECIAEDKDSDGKSESGELDLDGIDDNEIERYILNDKE
VRVKTALWMKQNEEYLREQKEKEERITKEKEQGTYKEKPKKTSKKREPIRASTAGEAIEK
MLEQKKISSKINYDVLRDLNSKGGSGNSSPAQPTSTEEPPSGPPGRKRLTRRKKQPNKTN
MGLATTIMGKRLRPLISSATKKKRAASQVTPNLTPAATPVLPNLSNPPTPNPAPPGPTMV
ESGPVAYDEVAEDEEEEEVEEPCVSALQLLGGNEYGCEAEEEEVF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgcatatgcaagaactgtggttgttccgagatcgacctcgatcaggctcgg
ggcaatgcagtatgcacgaactgtgggtctgtgctggaggacaacatcatcgtgtccgag
gtgcaattcgtggagggcagtggtgggatttcgtcagctgtggggcaattcgtctcagca
gatggtccagtgaaagccccagtcctgggtactgggttccacaccagccttggaaaagag
tcccgtgctcagacgctgcagaacggaaagcggcagatccacaacctgggcagccagctg
cagctcaaccagcactgcttggacacggccttcaacttctttaagatggtggtgagcaaa
cacctgacgcgtggacgcaagatggcgcacgtcattgctgcctgcctctacttggtctgc
cggactgagggcacgccccacatgcttctggacctgagtgatctcctacaggtgaacgtg
tacatcctagggaagaccttcctcctgctggctcgagagctctgcatcaactccccagca
atagacccttgcctgtacatccctcgtttcgcccacatgctggaatttggggagaagacc
catgaggtgtccatgactgcactgcgcctactacagaggatgaagagagactggatgcac
acaggacgcaggccctctgggctgtgtggggcagcactgctggtggctgcccggatgcac
gagttccgccgcaccgtcaaggacgtgatcggagtggtgaaagtgtgcgaggccacactg
aggaaaagattgacagagttcgaggacactcccaccagtcagctgaccatcgatgagttc
atgcgggtggatctggagcaggagtgtgacccaccctctttcactgctggacagaggaag
gtcaagatgcaggcgcttgaacaagagttagccaaaaagctggatgaagttcaaggtgaa
atcagtttgtatcgagacgagatcgagacggagctggaaaacagcaggccaaagctcaga
gggatctacgctgcctatgccaaagaaatagacccgctagacgaggtgctttctcaggcc
tcgtgctccagccccagggaggtggaccccgaggaggacgaggagctggaggcagttgcc
caacacctgaaccaggacttcctctgccaggttatccatggggaacagcaaggggacgaa
agagggggagaaggagtgacagaggaggcaccccctccacatccaccacccagaggaggg
ccctccctagcttccatcctgggtcccttgcctagcgcggctagcctggggctcagtgag
tccatccatgagtgcatcgcagaggacaaggacagtgatggcaagtcggagagcggggaa
ttggacctggacggcatcgacgataatgaaattgagaggtatatcctcaacgacaaagaa
gtgagagttaagacggccctgtggatgaagcagaatgaggaatatctgagggagcagaaa
gaaaaggaggagaggataactaaagagaaagagcaagggacctacaaggaaaagcccaag
aaaacgtccaagaagcgggagcccatccgtgccagtacggcgggcgaggccatcgagaag
atgctggagcagaagaagatctccagcaaaatcaactacgacgtgctgcgtgaccttaac
agcaagggtggcagcggcaacagcagccctgcccagccaacctccacggaagagccaccc
agtggcccccctgggcggaagaggctgacccgccgcaagaagcagcccaacaagaccaat
atgggcctggccaccaccatcatgggcaagagactccgtccacttatatcctctgcaacc
aagaagaagagagccgcttcacaggtgacccctaacctgaccccggctgcaacccctgtt
ctgcccaacttgtccaacccgcctacccccaacccggcccctccaggacccactatggtg
gagagtggcccggtggcctatgatgaagtggcagaggatgaagaggaggaagaagtggag
gagccctgtgtcagtgcgttgcagctcctgggaggaaacgagtacggctgtgaggctgaa
gaggaagaggttttctag
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integrated database retrieval system
