Oncorhynchus tshawytscha (Chinook salmon): 112250470
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Entry
112250470 CDS
T05605
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112250470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112250470
Spliceosome [BR:
otw03041
]
Complex A
U1 snRNP components
U1 related factors
112250470
Complex B
112250470
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
112250470
NCBI-ProteinID:
XP_042177731
UniProt:
A0A8C8EJC3
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Position
LG05:30667211..30681218
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AA seq
878 aa
AA seq
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MSFPPHLNRTLLPPGIPPPQFAGFPSGTPMIPVHMGIMTQTPAVLVPTSMPAAPRKEAAK
ETDENSGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQGKNRTAFGFC
EYKEPESTLRALRLLHELQIGVKKLLVKVDAKTKAQLDEFKAKKKSSTNGNGAKAEGGKE
EAEEEEVIDEDTKRRDQVVKGAIDGLIREYASELNAASNDESPHRRKKKEKKEEEDINAI
DGLEDDKRDLISREISKFRDTHKKLEEEKDKKDKERAEFDRERRERDKEREHERERRDRE
REKEREKERERERERERERERERDRSDRDRDRNRTKEREWERERSRDRSKDRSHSREVSR
DRDKDKKRDQEDEEEVYERRRLERKLRDKEAAYQERLKNWEIRERKKARDYSKESEREEE
RRREMTKESKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETEVDERDRKREKEELE
EIRQRLLAEGHPDPEAEIRRMEEEAERLRQPPVKPEPDPEEERVHKAPRVERDRRGDRDR
DRGDRERERGDRDRERGERDRGDRERERGERDRGDRERERGERDRERGDRDRERDRGDHH
VPHHHHPHSDHDVEEGEEEFDDDDQSGSKPCLKPTLRPITAAPSVSSASGGATPNTPCGG
DESPCGIIIPHENSPPHETPPQEEFRPKIGLSLKLGATSSPSQPNVAIKRKKLTVDSVFN
KFDDEEADEAPRKRKLVPLDYGDDDKNLQSVVDGASGLAAIKGANTEEKRKHIKSLIEKI
PTGKAELFSYPLDWSAVDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHGTPQ
GILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcctcatctcaaccgaacccttctgccaccgggcatcccccctcctcag
tttgctggttttccttcaggtaccccaatgataccagtgcacatgggtattatgacccaa
acccccgcggtcttggtgcccacctccatgcctgcggcacccaggaaggaggccgccaag
gagacggacgagaacagtggtcccaccaccactgtatttgtagggaacatctcagagaaa
gcctcggacatgctgattcgacagctgctggcgaaatgtggcctggtcctaagctggaag
agagtccaaggagcctctggaaaacttcaaggtaaaaacagaacagcttttgggttctgt
gagtacaaagagcccgagtcaacgctgcgggccctgcggctgctccacgagctgcagatc
ggggtgaaaaagctgctggtaaaggtggatgccaagaccaaggcccagctggatgagttc
aaggccaaaaagaagagcagcaccaacggcaatggggcaaaggcagagggtggaaaagag
gaggcggaggaagaggaggtgatcgacgaggacaccaagaggcgggatcaggtcgtcaag
ggtgccatcgacggtctgatccgcgagtatgccagcgagctcaatgctgcctcgaatgat
gagtccccccaccgcaggaagaagaaagagaagaaagaagaggaggatatcaacgcaatt
gacggattggaggatgacaagagagacctgatttctagagagatcagtaaattccgcgac
acccacaagaaactggaggaggagaaggacaagaaagacaaggagcgtgcagagtttgat
cgcgagcgacgggagagggacaaggagagggaacatgaaagggagcgccgggaccgcgag
cgggagaaagagcgcgagaaggagagggagcgggagagggagcgcgagcgtgagagagaa
cgtgagcgggaccgaagtgaccgagaccgtgatcgcaaccggacgaaggagagggagtgg
gaaagggagaggagccgtgacaggagcaaggaccgcagtcactccagagaggtgagtcgc
gacagagacaaggacaagaagcgtgaccaagaggatgaggaggaggtctacgagcggaga
aggctggagaggaaactccgagacaaggaggcagcctatcaagagcgtctgaaaaactgg
gagatccgcgagaggaagaaggctcgagactactccaaggagtctgagcgggaggaagag
cgcaggagagaaatgactaaagaaagcaaacggctgaaggagttcctggaggactacgat
gacgacagagatgaccctaagtactacaggggcagcgcactgcagaagcgtctgagagac
agggagaaggagactgaggtggatgagcgcgacaggaagagagagaaggaagagctggag
gagatcagacaaaggctgctggccgagggacacccagaccccgaagccgagatacgcagg
atggaagaggaggcggagcgtctgcgccagcctccagtgaagccagagcccgaccccgag
gaggagcgggtacacaaggccccacgggtggaacgggatcgccgaggagacagagatcga
gaccgaggtgatcgggagagagagagaggtgatcgggatagagagaggggggaaagagac
cgaggtgatcgggagagagagagaggggaaagagaccgaggtgatcgggagagagagagg
ggggaaagagaccgggagagaggggatagagaccgggagagggacagaggggaccaccat
gtaccccaccatcaccacccccactctgatcatgatgtggaagagggggaggaggagttt
gatgacgacgaccaatcggggtccaagccctgcctgaagcccacgttgcggccaatcact
gcggccccctctgtttcgtcggccagcgggggcgccacccccaacacgccttgtggcggg
gacgagtcaccctgcggcatcatcatcccccacgagaactcgccccctcacgagacccca
ccccaggaggagttccgccccaagatcggcctcagtctcaaactgggagccactagcagc
cccagccagcccaacgtggctatcaaacgcaagaagctcactgtggacagcgtctttaac
aaattcgacgacgaggaggcagacgaggctccccgcaagcgcaagctggtaccactggac
tacggcgacgacgacaagaacctccagagtgtggtagacggcgcctcgggcctggcggcc
atcaagggcgccaacacagaggagaagcgcaagcacatcaagagcctgatcgagaagatc
cccacgggcaaggcagagctgttctcctacccgctggactggtccgcagtggactcgact
ctgatggatcgacgcatacgcccctggatcaacaaaaagataatcgagtacattggagaa
gaggaggctacgctagtcgattttgtctgctccaaggtgatggctcatggtacaccacag
ggtatcttggatgatgttgccatggttttggatgaagaagcagaggtcttcatcgtcaag
atgtggcggttgctgatctacgaaactgaagccaagaagattgggctggtgaaataa
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