Oncorhynchus tshawytscha (Chinook salmon): 112250484
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Entry
112250484 CDS
T05605
Symbol
rad51b
Name
(RefSeq) DNA repair protein RAD51 homolog 2 isoform X1
KO
K10869
RAD51-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112250484 (rad51b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112250484 (rad51b)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
112250484 (rad51b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_XRCC3_RpoA
AAA_25
ATPase
RecA_N
DnaB_C
ABC_tran
AAA_22
RAD51D_N
DUF7125
Rad17
ATPase_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
112250484
NCBI-ProteinID:
XP_024276442
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Position
LG05:31638644..31711590
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AA seq
380 aa
AA seq
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MASKKLRRTGVSLEVCERLKRHQIESCQDLLSLTPLEVMRLAGQSYQQVLMLLQSVSKAC
APSMTTALEVWKQRADLCFSTSLPALDRLLQGGLPRGTLTEVTGPSGCGKSQVCMMLSVL
ATLPKYMGGLDSGVIYIDTEAAFSAERLVEIAQSRFPDYFCEKERVLEMAGRVHLFQELT
CQDVLDRLERLEEDIISSKAGLVILDSVASVVRKEYDTTLPGNLSHRSNLLGQEAATLKY
LAQAFHIPVVLTNQITTHVGDRGERGAASFRGASDERDSGYVTAALGNTWSHSVNTRLIV
QYVDAHQRQIVIAKSPVAPFAVLNYTVQKEGIRLEDVRTRNPVTTLGSVAVISRREREMI
NHTLSKYAGCDVLSHSEGKT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaaagctcagaagaacgggtgtgtcactcgaagtatgcgaacgactcaag
cgccaccaaattgaaagttgccaggacctgctgtccctcacacctctagaggtgatgcgc
ctcgcggggcagagttaccaacaggtgttgatgctacttcagtcagtcagcaaggcctgt
gccccctcaatgaccacggcgttggaggtgtggaagcagagggctgacctgtgtttctcc
acatccctacctgccctggacagactgcttcagggtgggctaccacgggggacactcaca
gaggtgactggcccctcaggttgtgggaagagccaggtgtgtatgatgctcagtgtgctg
gccactctgccaaagtacatgggtggcctcgacagcggagttatctacatagatacagag
gcggctttctcagcggagaggttagtggagattgctcagagcaggtttccagactacttc
tgtgagaaggagcgtgtgttggagatggctggacgtgtccacctttttcaggagctcacg
tgtcaggatgtcctggacagactggagaggctggaggaggacatcatctcctccaaggct
gggttggtgattcttgactcggtggcctcagtggtgaggaaggagtatgacacaacactt
ccggggaacctcagtcaccgcagcaacctgctgggccaggaggctgccaccctcaaatac
ctggctcaggcctttcacatccctgtggtcttgaccaaccagatcacgacgcatgtgggc
gatcgaggggagagaggcgctgcgtcattcaggggagcatccgatgagagggattctggg
tatgtgacggcggcgctggggaacacatggagtcatagcgtcaacacccgcctcattgtc
cagtatgtagacgcacaccaaagacagattgtgatagcgaagtcacctgtggccccgttt
gctgttctaaactacaccgtccagaaggagggcatccgtctagaggatgtgcggaccaga
aacccagtgacaacactcgggtctgtagctgtcatttcccggcgggaaagagaaatgatc
aaccacaccctcagcaagtatgctggatgtgatgtactctctcactctgagggaaagaca
taa
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