Oncorhynchus tshawytscha (Chinook salmon): 112250532
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Entry
112250532 CDS
T05605
Name
(RefSeq) SH3-containing GRB2-like protein 3-interacting protein 1 isoform X1
KO
K20065
SH3-containing GRB2-like protein 3-interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250532
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112250532
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
muHD
Adap_comp_sub
ATG29_N
Motif
Other DBs
NCBI-GeneID:
112250532
NCBI-ProteinID:
XP_024276532
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All DBs
Position
LG01:complement(39268748..39374350)
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AA seq
998 aa
AA seq
DB search
MAEELCTGWFRIVAGSLEIEECKSAIMMEGLKKRTRKAFGIRKKEKGDKDNDSTGSPDRE
GGDPQEIESSQKKANGAAVNGFSGEIDWDRYNTPTVDDEGYSLRPDEEEGPGSAGPKPPK
EHFFSSSESEGEEDHRKKFKIKIKPLPVESANCLAPSVDELKASIGNIALSPSPLRSSPR
RSPGLMTKDSGEEIQVARPRRPAPIEVPTLAAPALQVPRSKRAPAVPVPEKKAAPVPEDT
AALFGPPLETAFGEQKTEVGISEPVVCGVWGAPLPESESLSPDFSFTRPFPTGTPPPLPP
KNVPTSPPLTGSPSADAAGLSIKAEGSGRKTSVPNLDNIFGPAEPPAFGEESVDKWICFS
EEESTASDKPPPPMSPPPPEDPPPLLYPPPLSLWMTLSLPPSLSPLPTSLPHRKNLSLHY
PPPHPLQMNQCPLPTVPPTQKDPTPPPSPLPPKDPTPPPTPTPTVVPTLDLTSSIAPAPL
VTSPTSVAPVPSAVPSSPKASTPVSPTSPPAPVEAHSRTIPRPLVLATEERRSPEAAALP
VPPAPPKEDLSETTTTLSPKDAGQVSRVAPPPPPPPTYRAVVSSPGPTTGGTGSGASSPA
RPATPSAPSAVVSSPTPPPPPPRPSSRPKLPPGKPSMGDVSRPFSPPVSHSSSPPPVAPL
ARAESTSSISSNNSLSAATTPTVGKDLTVSVSENDQPSLVWFDRGKFYLTFEGCSRGPSP
LTMGAQDTLPVAAAFTETVNAFFKGADPNKCVVKITGEMVLSFPAGITRHFANNPSPAVL
TFSITNYSRLEHVLPNPQLLCCDTVTTPNPDCKNFWVNMPNLMTHLKRVAEQKPQATYYN
VDMLKYQVSAQGLVSTPLNLAASWRCVPTSTDLRIDYKYNGSAMTTPVALNNVQFLIHVD
GGVTKLQAVLPPAAWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSKPSSLAVQ
FTSEGSTLSGCDIELAGPGYRFSLVKKRFAAGKYLADN
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagctgtgtaccggctggtttcgcattgtcgcaggctccttggagatagag
gaatgcaaatctgcaatcatgatggaaggattgaaaaagcgtaccaggaaggccttcggg
atacggaagaaagagaagggagacaaggacaatgactcaacggggtcccctgacagagaa
gggggtgatccccaagagattgaatcgtcacagaagaaagccaatggtgcggctgtcaat
ggattctctggagagatcgactgggacagatataacacccctacggtggacgatgaaggt
tacagtctcaggccagacgaggaggaggggccaggatcagctggccccaaaccacccaag
gaacacttcttctcctccagcgagtcggagggagaggaggaccaccgtaaaaagtttaag
atcaagattaaaccattaccagtggaaagtgccaactgtttggccccctcagtagatgaa
ctcaaagcctccataggcaacatagctctgtctccttctcctctgaggagtagtccgaga
cgtagcccggggttgatgacaaaggactctggtgaagagatacaggtggctcggccaaga
cgtcctgcacccattgaggtccccacattggcagccccggcgctacaagttcccagaagt
aagagagccccagcagtaccagtaccagagaagaaagcagcgccagtaccagaggacact
gcagccttatttgggcctccgctggagacagccttcggagagcagaaaactgaagtgggt
atatctgagccagtggtgtgtggcgtatggggtgctcctctacctgagtctgagtcactg
agcccagacttctctttcacaagacccttccctacaggcactccgcccccgcttccgccc
aagaatgtcccgacctcccccccactgactggctccccctctgcagatgctgctggtttg
tcaataaaggcagaaggctcagggaggaagacctccgtcccaaacctggataacattttt
ggcccagcggaaccccctgcttttggcgaggaatctgtcgacaagtggatctgcttcagc
gaggaggaatccacagcctctgataaaccaccccctccaatgtccccaccccctccagaa
gaccccccgcccctcctgtacccacctcccctctccctctggatgaccctgtccctgccc
ccctctctctcccctcttcccacctccctcccccacaggaaaaacctgtctctccattac
ccacctccccaccccctacagatgaaccagtgccccctacccactgtcccacccacacag
aaagaccctacacccccaccctcaccacttcctccaaaggaccctacaccaccccccact
cccacacccactgtagtccccactctcgacttaacctccagcatcgcccctgctcccctt
gtcacctcacccaccagcgttgcacctgttccctctgcagttccctcttctcccaaagca
agcacacctgtctcccccaccagcccccctgcccctgtggaggcacactcacgcaccatt
ccccggccccttgtcttggccacggaggaacggaggagtcctgaagcagcagctctgcct
gtcccacctgcccctccgaaagaggacctcagtgaaacaaccaccaccctgtcacccaaa
gatgctggccaggtttcccgtgtagcgcctccccctcctccaccccctacatacagggca
gtggtgtcctcaccaggaccaacgacagggggtacgggtagtggagcgtcctctccggct
cgacctgctacaccgtcagctccatcagctgttgtcagcagccccaccccacccccacct
ccgccacgcccttcctcacgacccaaactgcctcctgggaaacctagcatgggggacgtg
agccggccttttagtcccccggtcagtcactcgtccagcccccctccagtcgcccccctg
gctcgggccgagagcacttcctccatctcctccaacaactccttgagtgcagccaccacc
cccaccgtcggtaaagatctcactgtctctgtgtcagagaatgaccagccttccctggtt
tggtttgacagaggaaagttttatttaacctttgaaggctgctccaggggccccagccct
ctcaccatgggggcccaggacacccttccggtggcggcagcttttactgaaacagtcaat
gccttcttcaaaggagccgaccccaacaagtgtgttgtgaagatcacaggtgagatggtg
ctgtcgtttccagcggggatcactcggcactttgccaataacccgtcccctgccgtgcta
accttcagcataaccaactacagccggctggagcatgtgctgcctaacccccagctactc
tgttgtgacaccgtcacaacacccaaccctgactgcaagaacttctgggtgaacatgcca
aacctgatgacccatctaaagagggtggctgagcagaaaccccaggccacatactacaat
gtggacatgctcaagtaccaggtatcagcgcagggcctcgtttcgacacccctgaacctg
gcagccagttggcggtgtgtgcccaccagcacggacctccgaatagactacaaatacaac
ggcagcgccatgacaacacccgtggctctcaacaacgtccagttcctgatccacgtggac
ggaggggtcaccaagctacaggctgtgcttccccccgccgcatggaacgcagagcagcag
agaatcctgtggaagattcctgatatttcccagaaatctgaaaatggaggcgttggctca
ttgttggcacggttccagctgtcggagggtcccagtaagccctcttccctggcggtccag
ttcaccagtgagggcagcactctgtcaggctgtgatatagagctggcagggcccgggtac
cgcttctcactcgtcaagaagaggttcgcagcaggaaaatacttggcagacaactga
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