Oncorhynchus tshawytscha (Chinook salmon): 112250534
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Entry
112250534 CDS
T05605
Name
(RefSeq) frizzled-3
KO
K02329
frizzled 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
otw04310
Wnt signaling pathway
otw04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112250534
04150 mTOR signaling pathway
112250534
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112250534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112250534
G protein-coupled receptors [BR:
otw04030
]
Frizzled / Smoothened family
112250534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
112250534
NCBI-ProteinID:
XP_024276537
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Position
LG05:34073163..34104574
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AA seq
723 aa
AA seq
DB search
MRVIIRTVPVSSLGPSLPLSLPLPAGTMGLLWVLCVSMLMAPAVVVEAIPMESAAGSHSM
FTCEPITLRMCQGLPYNSTFMPNLLNHYDQQTAALAMEPFHPMVNLQCSSELRMFLCALY
TPVCTEYGRMTLPCRRLCLRAKGDCYKLMDMFGVTWPEEMDCNRFPDCDEPYPRPVDLLS
RSDSTESPISVQRDYGFWCPRELKIDPDLGYTFLGVRDCSPPCPNMYFQRDELVFARYFI
GVVSIVCLSATLFTFLTFLIDVSRFRYPERPIIFYAVCYMMVSLVFFLGFLLEDRVACNA
ASPGRFRASTVTQGSHNKVCTLLFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEK
KALLFHACAWGLPGCLTVTLLAMNKIEGDSVSGVCFVGLYDRTALRWFLLVPLGLDVLVG
VALLLAGILALNRVRMEIPLEKENQDKLVKFMIRIGVFSVLYLVPLLTVIACYLYENSYR
TVWETTWVQERCREYHIPCPYQVEQTSRPNLSLFIIKYLMMLVVGIPSVFWVGSKKTCFE
WASFFHGHRRKDSVVNESRQVLQEPDFAQLLLRDPNTPIARKSRGTSTQGTSTHASSTHL
AMLDEPPSGSTSRASSVRSARSKMSSFHGSLHRSRDSRYTACSFRGVDDRLPYGSMPRLN
DQSGSRHCSTNRLDSLSKHGSTQRLDSQSRHSSIRDLSNVTQAIQSAPGNGIHRVLEEDG
ATA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgatcattcggactgtccctgtgtccagcctgggtccctccttacccctgtct
ttgcccctgcctgcggggaccatggggctcctgtgggtgctgtgtgtgtccatgctgatg
gctccagcagtggtggtagaagccatccccatggagtctgctgctgggagccacagcatg
ttcacctgtgaacctatcaccctgcgcatgtgtcaggggctgccctataactccaccttc
atgcccaatctcctcaaccactatgaccagcagaccgccgcgctcgccatggagcccttc
caccccatggtgaacctgcagtgttcgtcagaactcaggatgttcctgtgtgccctctac
actccagtgtgtacagagtacgggcgcatgacactgccctgccgacggctgtgcctgaga
gccaagggagactgttacaaactcatggacatgttcggcgtcacctggccagaagagatg
gattgtaacaggttcccagactgtgacgagccatacccccgtcctgtagatctgctgtcc
aggtcagactccacagagtcgcccatctccgtccagcgcgactatggcttctggtgcccc
cgcgagctcaagatcgaccccgacctgggctacaccttcctgggtgtgagggactgctcg
cccccctgccccaacatgtacttccagcgggacgagctggtcttcgcccgctacttcatc
ggcgtggtgtccatcgtctgtctctcggcaaccctcttcaccttcctcaccttcctcatc
gacgtgtccaggttccgctacccggagcggccgatcatcttctacgccgtgtgttacatg
atggtgtccctggtcttcttcctgggcttcctgttggaggaccgggtggcgtgcaacgcg
gcgagccccgggcgcttccgggcgtccaccgtcacccagggctcccataacaaggtgtgc
actctgctgttcatggtgctctacttcttcaccatggctggcagtgtgtggtgggtcatc
ctcaccatcacctggttcctggctgccgtgcctaagtggggcagcgaggccatcgagaag
aaggccttgctcttccatgcctgtgcctggggcctgcccggctgtctgactgtcactctg
ctggccatgaacaagatcgaaggggatagtgtcagcggggtgtgttttgtggggctgtat
gaccgcacagcgctgagatggttcctgctggttccgctgggcctggatgtactggtgggg
gtggcgttgctgctagcgggcatcctggcgttgaaccgcgtccgtatggagatccctctg
gagaaggagaaccaagacaagctggtgaagtttatgatccgtatcggggtgttctctgtg
ctctacctggtccctctgctgacggtcatagcctgctacctgtatgagaacagctatagg
actgtctgggagactacctgggtacaggagcgctgcagagagtaccacatcccctgtcca
taccaggtcgagcagaccagcagaccaaacctgtccctgttcatcataaagtacctgatg
atgttggtagtagggatcccttcagtgttctgggtgggcagcaagaagacctgcttcgaa
tgggccagcttcttccacggacatagacgcaaagatagcgtggtcaacgagagcagacag
gtactccaggagccagattttgctcagctgctcctgcgggaccccaacacccccatcgcg
aggaagtccagggggacatccacgcagggcacctccacccacgcttcctccacccacctg
gccatgctggacgagccccccagtgggagcaccagccgggcaagtagtgtccgcagcgcc
cgcagcaagatgagcagcttccatggaagtctgcatcgatccagagacagcaggtacaca
gcatgtagtttccgcggcgttgacgatcgcctcccctatggcagcatgccccgcctcaac
gaccaatcagggtccagacactgcagcaccaacaggctagacagcctatcaaagcatggc
tccacccagcgtctggatagccaatcacggcacagcagcatcagggaccttagcaacgtc
acccaggccattcagagcgcccccggcaatggaatccacagggtccttgaagaggatgga
gccacggcctga
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