Oncorhynchus tshawytscha (Chinook salmon): 112250535
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Entry
112250535 CDS
T05605
Name
(RefSeq) left-right determination factor 2-like
KO
K04668
left-right determination factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112250535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112250535
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112250535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
112250535
NCBI-ProteinID:
XP_024276541
UniProt:
A0A8C8M646
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Position
LG05:34195966..34201498
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AA seq
358 aa
AA seq
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MDLLRVCVLCAAAFVTVSKAFTHNDMKDALLQKLGLDDVPKIHKRDLENLVIPTHVKNKY
LSMLKLHHDRRRRSLPSLAGILRGIRGNADISGVFVYSDTTRQRMVFDMDTRIPHNSEVT
MAELKLYNKAPNKRSMPERRNHRPVNNARVSIYWVDMLENGSNRTSLVDSRLIPIHETGW
KSFDVTQALHYWSKTQQKTPMHLEVWIEGERPGSYAAEIAKSVHFTTQDQADNTLGKPEL
VLYTLNLEEFGSRGDCENNPDKDTCCRDKYFIDFRALTWTQYWIIEPAGYQAYRCAGGCK
QPKRNYGYGERKCSIAESAPLPIMYLVKKGDYTEIEVAEFPNMIVESCACTMDNISIV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctccgtgtttgcgttttgtgcgctgctgctttcgtcaccgtctccaaggct
tttacgcacaacgacatgaaggatgcgctgcttcaaaaacttgggctggatgatgttccg
aaaattcacaaaagggacttggagaatcttgtcatcccgacgcacgttaagaataaatat
ctgtcaatgctgaagctgcaccacgacaggcggcgcaggtctctgccgagcttggcgggg
atcctgaggggaattcgaggaaatgcagacatctctggggtgtttgtgtactcggacacc
actcggcaacggatggtcttcgatatggatacccgcatcccccataacagcgaggtgacc
atggccgaactgaaactgtacaataaagcccctaacaagcgctccatgcccgagaggagg
aaccaccggccagtcaataacgccagagtctccatctactgggtagatatgctggagaac
ggctctaacagaacctctctggtggactcacggttgatccccatccatgagaccggttgg
aaaagctttgatgtcactcaggctttgcactattggtcaaagacgcagcaaaaaacacct
atgcacctggaggtgtggatcgagggcgagagacctggcagctacgcggcagaaattgct
aagagtgtccactttaccacccaggaccaggcggacaacaccttgggaaaacctgagctg
gtcctctacacgctcaacctcgaagagtttgggtctcgaggcgactgtgaaaacaaccca
gataaggacacgtgctgcagagataaatacttcatcgatttccgcgcgctcacgtggacc
cagtactggatcatcgagccagcgggataccaggcctacagatgcgccgggggatgcaag
cagcccaagcgcaactatggctacggggagaggaagtgtagcatcgcagagagcgctccg
ctgcccattatgtacctggtcaagaagggcgactacaccgagatagaagtggctgagttc
cccaacatgatcgtggagtcatgtgcctgcaccatggacaacatctccatagtttga
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