Oncorhynchus tshawytscha (Chinook salmon): 112250536
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Entry
112250536 CDS
T05605
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112250536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112250536
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
hnRNP proteins
112250536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
Zeta_toxin
CPT
Motif
Other DBs
NCBI-GeneID:
112250536
NCBI-ProteinID:
XP_024276543
UniProt:
A0A8C8M720
LinkDB
All DBs
Position
LG05:complement(34204422..34214307)
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AA seq
838 aa
AA seq
DB search
MSSINVKKLKVNELKDELKKRQLSDKGLKAELMDRLQAALDEEALAGDSPLGLEAAEGGF
PEGDDDDAAAAANDQEDMGEDEEDEGPVVESMDANEEEENGNGEGDAAVVNQCEEEENAA
QEDDEMGEVEEEEMDPMLKEGVDDMEKITLDAEDGEPGDHPAEGDADKDTNADQKNKKGV
KRRREEHGRGYFEFIEENKYSWPSLKSPLPPLEEEDEEFDDTKVCLDNFNCDLHFKVSRD
RYSASSLTMESFAYLWSGGRASYGLSQGKACYEMKITEKIPVKHISSKNMDIHEVQVGWS
LATGSLLLGEEEHSYAYSGKGKKTTNCVTEDFGETYDENDVICCLINFEGEEVEMSFSKN
GNEPVVAFQASKESLVGKALFPHVICHNCAVEFNFGQMDTPYFPQPEGYTFLQQVTMDDR
VRGPKAPDTKKDCEVIAMVGLPGSGKSTWVNKHIQENPGKYYILGSDTIVEKMMIGSLKR
QAKDTTKLTAISQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGYQREAV
VVCPSDDDYKERAQKKAESDGKDVPEHALLKMKGFFTLPEEGESFAVVSYAELQKEDAAK
LVEQYKEESKAALPAEKKPNQGSLTPKRGGGSVRGGGRGKNQFNRGGGPGQRGGGRGGFQ
QRGNFRGAPGPRGGFTRPPRGFMPPPAFRGGFANRGNFNRGGALMAPQGGAPRGGPMRGH
RGGAMNRGGPPMSRGGGGGHMSRGGGGGHMSRGGGGHRGNFNQGFQPRAGNSRGNFGNKN
GSGGFGGGRNGGGRGGGFGDNRTGGGFGMDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattaacgtaaaaaaactgaaagtaaacgagttgaaggacgagctgaaaaag
cgtcagctgtcggacaaggggttgaaggccgagttgatggaccggttgcaggccgcgctt
gacgaagaggccctggccggagattctccccttgggctggaggccgcggagggaggcttt
cccgagggagacgacgacgacgccgccgccgctgctaatgaccaagaggacatgggggaa
gatgaagaagacgagggccccgttgttgaaagcatggatgccaacgaggaggaagagaat
ggaaacggagagggagacgccgctgtcgtgaaccaatgcgaggaggaagagaacgcggcc
caggaggacgacgaaatgggtgaggtagaagaggaagaaatggatccaatgctgaaggaa
ggtgtggacgacatggagaaaattacattggacgcagaagatggtgagcctggagaccat
ccagcagagggggatgcggacaaagacacgaatgctgatcagaagaataagaagggtgtt
aagagacgccgggaggaacatggaaggggctactttgagtttattgaagagaacaaatac
agctggcctagtctcaagtctccactgccacccctggaggaggaagatgaggagtttgat
gatacaaaagtctgcctggacaactttaactgcgacctgcacttcaaggtgtcccgggac
cgctacagcgcctcctctctcaccatggagagctttgcctacctgtggtccgggggcaga
gcctcatacgggctgtcccagggcaaggcctgctacgagatgaagataactgagaaaatc
ccagtgaaacacatatccagtaagaacatggacatccatgaggtccaggttggatggtcc
ctagctactggcagtctgctccttggtgaggaggagcattcctatgcctactctggcaaa
ggcaagaaaaccaccaattgcgtgactgaagatttcggggagacttatgatgagaatgac
gtcatctgctgcctcattaactttgaaggtgaggaggtggagatgtccttttctaagaac
ggtaatgagccagtggtggccttccaggccagtaaggagtccctagtagggaaagcgctc
ttcccccacgtcatctgccacaattgtgcagtggagtttaactttggccagatggacacg
ccctacttcccccagccagagggctacaccttcctgcagcaggtcaccatggacgaccgt
gtccgcggacccaaggcacctgacaccaagaaggactgcgaggtgattgccatggtgggc
ttgcctggctcaggaaagagcacctgggtcaacaagcatatccaggagaaccctgggaaa
tattacatcctgggtagcgacaccatcgtggagaagatgatgattggcagtttgaagcgt
caggcgaaggacacaacaaagctcacggccatttcccagcgtgcacctctcttcctgggc
aagttcattgagatcgctgctcgcaaaaagaggaactatatcctggaccacaccaacctg
tctgccccgggccaaaagaggaagatgtgtctatttgctgggtaccagcgggaggctgtg
gtggtctgtccctcagacgacgactacaaggagagggcccagaagaaggccgagagcgac
gggaaagacgtgcccgagcacgctctcctcaaaatgaaaggattcttcaccctgccagag
gaaggcgagagcttcgctgtggtgagctacgctgagctgcagaaggaggatgccgccaag
ctggtggagcagtacaaggaggagagcaaggcggccctgccggctgagaagaagcccaac
caggggtctttgacccccaagagaggaggagggagtgtccgggggggaggcagaggcaag
aaccagttcaaccgtggtggtggacctggccagagaggaggtggacgaggtggcttccag
cagagaggcaacttccgaggagctccaggcccacgtggtgggttcactcgcccccctaga
gggttcatgccccctccagccttcagaggtggattcgccaaccggggcaacttcaacagg
ggcggcgccctcatggccccccaaggaggggccccaagaggaggaccgatgaggggccac
aggggtggagccatgaacagaggtggtcctccaatgagccgaggaggaggcggcggtcac
atgagccgaggaggaggcggcggtcacatgagccgaggaggcggcggtcacaggggcaac
ttcaaccaggggttccagcccagagcaggcaacagccgtgggaattttggcaacaagaat
ggcagcggtgggtttgggggcggcaggaatggtggaggacgtggcggcggatttggagac
aacaggactggtggaggatttggcatggacaaggctcaggccttcaaccagagctggcag
caagggttttggaaccagaagccatggagccagcagtatcagccaggatactattaa
DBGET
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