Oncorhynchus tshawytscha (Chinook salmon): 112250561
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Entry
112250561 CDS
T05605
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112250561
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112250561
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
LRR_1
ig
Ig_2
fn3
LRR_9
Sp38
V-set
DHU1_N
Motif
Other DBs
NCBI-GeneID:
112250561
NCBI-ProteinID:
XP_024276581
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All DBs
Position
LG05:35700066..35719239
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AA seq
820 aa
AA seq
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METLLVYLMVLGMAVKAHKVQLCPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKQRDFANMTKLQDLTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLHHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESTPWVAIQRMTSLHTLG
LDHNMLSYIPIGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSMGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSNSSRAVVHSDGTLDILITTVKDSGSFTC
VASNPAGEAQQTVDLVIVKLPHITNSTVKKELNPGSSDIATVMKTGGGEGGGMVPLGNTK
TSQEKKVVITEATSTSVLVRFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPSSSKSILVN
NLAAGTQYDLCVLAIYDDLVTSLTATRVVGCVRFTTEPQYLRCHFMQSQFLGGTIVVIIG
GIIVASVLAFIIFLIVRYRVCNQGDEDKALEMGEIPSLSSDGQLQGCGVPKAMSKSLSKQ
ILQPEKPETEDKESLRVALPPRKPVKQQQQPPAPTTTTSTKPSIPDCTVSTSAASHSWHP
ASPVTLRQKRADFTVAGGSKPGEARRAEGQTDVELENTNRNNSSEAKMAAALAVPVPARS
TKWTPVARRLRPPGASSHHYMTVPTGGVRVNRRHSLNVDSYKERCYVSLVQQQPKPGGSL
CSKRSLSMSGELPTLESAMANIRRGRDKLSRSEWLLESTL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgctagtttacctgatggtccttggcatggctgtaaaggcccacaaggtc
cagctgtgcccaaaacgctgtgtctgccagatgctcaaccccaacctggcaaccctctgc
gacaagaagggcctcctcttcgtcccgccaaacatcgaccggcacaccgtcgagatgcgt
ctgggcgacaacttcgtcacgagcatcaaacagcgggactttgccaacatgaccaagctt
caggacctgacgttgtctcggaacaccatcggttccatctcgcctcacgcctttaaagat
ctggagaacctcagggccttgcacttggacagcaaccgtctgacgaggctcaccaacgac
accttcagtgggatgtccaaacttcaccatctcattcttaacaacaaccaactgattcat
atccacattggggccttcaatgatctcacggctctagaggagttagatctgtcctacaac
aacttggaaagcaccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacatccctataggaaccttctccggcctgcagaagctc
aaacggcttgacgtcacctccaacaagctccagaagcttccgccagaccctgtgttccag
cgggctggggttctggccacgtcaggaagcatgggtccgtcgtcatttgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctgtggctgaggaggttgaggcgggag
gatgatctggagacatgtgcggctccgcagcacctggctggacggtacttctggaccgtg
tctgaagaagagttcctctgtgagccgcctctcatcaccagacactcccaggagctgcga
gcactggagggtcagagtgtagctctgcgctgcaaggccaggggcgacccagaccccatc
atccactggattgcgccggacggccggctcatgtccaattcctcccgggccgtggtgcac
agtgacgggactctggacatcctcatcaccactgtgaaggactcaggctccttcacctgt
gtcgcctccaacccggccggggaggctcaacaaactgtggacctggtgatcgtcaaactc
ccacacatcaccaacagtactgtgaagaaggaactgaacccaggttcttctgatatcgcc
acggtaatgaagacgggtggtggggagggcggaggcatggtgccactgggaaacacgaag
acgagccaggagaagaaggtggtgatcactgaggcaacgtctacctccgtcctggtcagg
ttcaacttccagaggagtataccaggcatccgaatgttccagatccaatacaacggaacc
tacgatgactctctggtttacagaatgatcccttcgagcagtaagagtatcctggtgaac
aacctggcggccggtacacagtacgacctgtgtgtgctggccatctacgatgacctggtg
acctccctgactgccacgcgggtggtggggtgtgtccgcttcaccaccgagccacagtac
ctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatcatcgga
gggatcatcgtggcgtccgtcttagctttcatcatcttcctcatcgtgaggtaccgagtg
tgtaaccaaggcgatgaggataaggctttggagatgggtgagatcccatctctgagcagt
gacggtcagctccagggctgcggtgtccccaaggccatgtccaaatctctgtccaagcag
atcctccagccagagaaaccagagacggaggacaaggagtctctgagggtggcccttcct
cctcgcaaaccggtcaagcagcagcagcaacccccagccccaaccaccaccacatctacc
aagccttccatccccgactgcactgtctctacttccgcagccagccactcctggcaccct
gcctccccggtcaccctgaggcaaaaacgggccgatttcactgtcgccggaggttcgaaa
cccggagaagcccgccgagccgaaggccagacggatgtggagttagagaacacaaaccgt
aataactcatcggaagccaaaatggctgccgccttggccgtacctgttcctgcccgttcc
acaaaatggacgccggtcgctaggcggctgcgcccccctggagcctcctcccaccattac
atgacggtaccaacagggggtgtgagggtgaaccggcggcactcactgaacgtggactca
tacaaagagcgctgctatgtcagcctggtacagcagcagccaaaacctggcgggagtttg
tgctccaaacgcagtctgtccatgagtggagaattgcccacgttggagagtgcaatggca
aacatacgcagaggcagagacaagctgtcccgatctgagtggcttcttgaaagcactcta
tga
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