Oncorhynchus tshawytscha (Chinook salmon): 112250575
Help
Entry
112250575 CDS
T05605
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112250575
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
112250575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
112250575
NCBI-ProteinID:
XP_024276612
LinkDB
All DBs
Position
LG05:36760686..36781101
Genome browser
AA seq
671 aa
AA seq
DB search
METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPVEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSVCM
DSGWLTCQTEIRLRLHFSKTSPVSITKKKYKKSRFRIKLTLEGVEEEDDEDEEPEQSAAS
WHKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYIIHSMDPDNLELTFDFFEEDM
GEHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPI
EGLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVE
FDVHLSKDCVPIVYHDLTCCISTKKKGDKHSLELFEVPVKDLTYDQLQQLKLGHASALKV
NDNKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMN
LFLDIILSCVLQRAGKRRVVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRC
RTTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLRE
QGIDGLIYDRICDDQVEQAKVFKVEEQHTLQETLKSFVCSCYSIPCQAPICTANSKVHNG
SAESDSGLSSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggttgaacacgatggcacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcagccacgtctgatgagccccaca
gaatcgcaccttgatattgacgatggccaatttggattccacaacggctcagtgtgtatg
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcacttctccaagacg
tctcccgtatccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggaggatgatgaagatgaagagccggagcagagtgcagcgtca
tggcacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcc
cgccactcccagcctgagtgtggttacgccctggaggcctcacagtggacagagtacatc
atccactccatggaccccgacaacctagaactcacctttgacttctttgaggaagacatg
ggcgagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctc
tcctcattcttcgtggagagtggcaaggacactggcgtggtcactctgcccatcatgaaa
cgcaactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatc
gagggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgcc
cccctggacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaagtc
agggagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggag
ttcgacgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacctgttgc
atctccactaagaagaaaggagacaagcactctttggagctgtttgaagtgccggtcaaa
gatctcacatacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtg
aacgacaacaaagatgacgacgacgaggaagaggttgacgaacaccagcccttcccttca
ttctcacagatcttccatgcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgg
atttgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaac
ctgttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcgtcgtc
ttctcctgcttcgaccccgacgtctgcaccatggttcgtcagaagcagaacaagtacccc
atcttgttcctgacccagggcatctctgagacctatcctgagctcatggacatccgctgc
aggaccacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcc
cacacagaggagctgcttcagaacctggagcacatccgagaggctcaatctaaaggcctg
gtggtgttctgctggggagacctcaacaatgaccacgacaacaggaccaagctaagggag
cagggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccaaa
gtcttcaaagtggaggagcagcacactctgcaggagactctgaagagctttgtgtgctcc
tgctactccatcccctgccaggcgcctatctgcactgccaactccaaggttcacaacggc
agtgcagagtccgactcgggcctcagctcttcctga
DBGET
integrated database retrieval system
