Oncorhynchus tshawytscha (Chinook salmon): 112250577
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Entry
112250577 CDS
T05605
Symbol
gzf1
Name
(RefSeq) GDNF-inducible zinc finger protein 1
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112250577 (gzf1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112250577 (gzf1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_16
zf-C2H2_6
zf-C2H2_PRDM15
C2CH-3rd_BIRD-IDD
zf-C2H2_8
zf-met
DUF7128
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
112250577
NCBI-ProteinID:
XP_024276618
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Position
LG05:complement(36794413..36800724)
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AA seq
874 aa
AA seq
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MSDQVVQLSSAFHHEDMLQSLHQLRLHGHLCDVTVQVDFQGELEEFEAHQAVLAASSGYF
KNILLAPDPPKKLFLGNVRTTDFTRFLEYVYTGKLEVDKEFAKDKIGVIHEVATLLECKS
LVQACSSVLYEGSLSLHRVEATMSQDMEADLYDVGEEEGALGVGVNKVPKIASTKRLTPP
TKPERGEKRAKVAVTAEEERSEVNKDTEVSGRRSNRLAGRRVFIDIPKKKYVRKMKDQTM
AQMEDLPDNNTQTTSQEENTYNTREAEEALPEPLPEKGGAGLESTDVDDEDEVEEGDIPE
DCPDDSLFLPSKEEEGEEEGEERATNRSSRRIDTQYKCDKCQRTFHYEKSYLKHIKTSHS
VQGEVTYRCDTCQQTFANRCNLKIHQRHVHSDERLFPCDVCTKTFKRKKDVTRHRRQVHE
GGGERHTCLVCNKALSSKTALTLHERTHTGDKPYSCTDCEAKFSQSSALKTHRRTHTGEK
PFACDQCDARFTQNHMLSYHKRAHTGEKPFMCESCGKSFASKEYLKHHSRIHTGSRPYKC
EQCGRAFAQRNSLHQHMKIHTGERPYHCTDCDKQFTQLNALQRHQRIHTGEKPYMCGLCN
RTFTDKSTVRRHTMTHDQNTPWKNYLVVLKDNMEKKTKKPRSLGRKVKVETVVREVEGDS
GAGGRLQEGTILVPGEPITLSASWGDPGTIALVSHTTLGGFTVIQTEMPAGTQLPIVTTD
CTGASVISLDGSTVSVPFTIPVSMSSISVSSSSSGVLPVQTVSVSVPVTVSGAIFAPVSE
TSLSTSCVLETAVSQTILAPDLEAGPCSDTTAIADPEEAVSECAPISEECVTVQTSELET
ETPSAAVSNEEQHSLPADIGTVEDLEVSTEDTVV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagtggtccaactctcctcagccttccaccatgaggacatgcttcagtct
ctgcaccagctcagactacatggtcacctgtgcgatgtcacagtccaggtggacttccag
ggtgagctggaagagtttgaggctcaccaggcggtcctagctgcctccagcggctacttc
aagaacatcctactggcaccggacccacccaagaaactattcttggggaacgttcgaacc
actgatttcaccaggttcttggaatatgtatacactggcaaactggaggtggataaagag
tttgctaaagacaagattggtgtaatacatgaagtggcgacactgttggagtgtaagagc
cttgtccaggcctgcagctcggttctctatgaaggcagcttgagtctgcacagggttgag
gcaaccatgtcacaagacatggaagctgatttgtatgatgtaggagaggaggaaggggcg
ctgggggtcggagtcaacaaagttcccaaaatagcctccaccaagaggctgacccctcca
accaaaccagagagaggggagaaaagggcaaaggtcgcggtcacagctgaggaggagagg
tcagaggtgaataaagacactgaggtctctgggaggaggagtaacaggctggcagggcgc
agagtcttcattgacattcctaagaagaagtacgtgaggaagatgaaggaccagaccatg
gcgcagatggaagatctgcctgacaacaacactcagacaaccagtcaggaggagaacact
tacaacacacgggaggcagaagaggcccttccagagccgctgcctgaaaaagggggggcg
ggactggagtcgacagacgttgatgatgaagatgaggtggaagagggagatataccagag
gattgtccagatgactccctcttcttgcccagcaaggaagaggagggtgaggaggaggga
gaggagcgtgccaccaacagatcatccagacgtattgacactcaatacaagtgtgacaaa
tgtcagcggaccttccactatgagaagagctacctgaagcacatcaagacgagccacagt
gtgcagggagaggtgacgtaccgttgtgacacctgccagcagaccttcgccaaccgctgc
aacctgaagatccaccagagacacgtccacagtgacgaaaggctgttcccctgtgacgtc
tgcaccaagaccttcaaacgcaagaaggacgtgacacgccaccgacgacaggtgcacgag
ggaggcggcgagcgacacacctgtcttgtgtgtaacaaggcgctgagctctaagacagcg
ttgacgctacacgagagaacgcacacaggagacaagccctactcttgcactgactgtgaa
gccaagttctcccagagctcagccctcaagacacaccgcaggactcacacaggagagaag
cctttcgcctgtgaccagtgtgatgcgaggttcacccagaaccacatgttgtcctatcac
aaaagggcccacacgggagagaagccttttatgtgtgagagctgtgggaaaagctttgcc
tctaaagaatacctgaaacaccactccagaatccacacaggctccaggccttacaagtgt
gaacaatgtggtcgggccttcgcccagagaaactccctccaccagcatatgaagatacac
acaggtgagcgtccgtaccactgtacagattgtgataagcagttcacccagctgaatgcc
ctccagaggcaccagaggattcatacaggggagaagccctacatgtgtggcctctgcaac
cgtaccttcacggacaagtccaccgtacgcagacacaccatgactcacgaccaaaacact
ccatggaagaactacctggtggtcctcaaggacaacatggagaaaaagactaagaaaccc
agaagccttggtagaaaggttaaagtagagactgtggttcgggaggtggaaggggatagt
ggagctggaggtaggctccaggaggggaccatattggttcctggtgagcccatcaccctc
tcagccagctggggcgacccagggaccatcgccctggttagccacaccaccctgggtggg
ttcacggtcatccagacagagatgccggctgggacccagctacccatcgtcaccacagat
tgcaccggggccagtgtcatctctctggatggatccactgtctctgtcccctttaccatc
cctgtctctatgtcctccatctctgtgtcctcgtcctcctctggcgtcctccctgtccag
actgtgtctgtctctgtcccagtcactgtttcaggggccatatttgccccagtttcagag
accagtctttcaacttcatgtgttctggaaactgcggtgtcgcagaccatcttggctcca
gatttggaagctgggccgtgttcagatacgacggccattgcggatcccgaggaggccgtt
tcagagtgtgcccctatctctgaggagtgtgttacagtgcagacatcagaactggagact
gagacaccgagcgctgctgtctctaatgaagaacaacacagtctaccagcggacattggt
actgtggaagacctggaggtgtccactgaagatactgtggtgtag
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