KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112250624
Entry
112250624         CDS       T05605                                 
Name
(RefSeq) lysine-specific demethylase 4B-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112250624
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     112250624
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     112250624
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112250624
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 Agenet Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 112250624
NCBI-ProteinID: XP_042177885
LinkDB
Position
LG05:complement(44471156..44562570)
AA seq 1193 aa
MSLTVPPDPTATMSLEASTPAPDLAPAPDLAPAPDLAPAPDLVPDPAPDLAPELTPDSAQ
APELASDPAPTPAPPVPVMNPGCKIMTFRPTMEEFKDFAKYVAYMETQGAHRAGLAKVIP
PKGWKPRQSYDTIEEMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRQLANSRTYCTP
RHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDPEIGEWNIGHLNTLLDMVEQECGIVIE
GVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAVPPEHGKRLERLAQGFFPG
SSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMVTFPYGYHAGFNHGFNCAEST
NFATLRWIDYGKMATQCTCRKDMVKISMDVFVRCLQPERYEQWKQGKDGTVLDHQRPTTL
NSPELEHWRANRVTYREKLLQRALQKKEQLRRLKLEEVKVLAEEGIELDAVAYQRQVEER
EAQRRQDREERMAREALETLEAMDREDRERQEALAAQAARGLPDPQVDPRHLTANGEKKK
KKKKKKKKKKQPALPSDPMNSFQAAFEKFATFKIPQTPKQPKGSNDTDLPAEGKLDVNGM
QQSSYSKQLKMRMEVKKSRRHPLSKPPMRSPLSIVKQETSSDEAELFSPWPLDGDVKKAG
HLWQNRTPNFLAEKGFNAAVATLEPYCAVCTLFCPYTQKDSSYPTNSPGAPNHHSVSRCG
SRTHPLVPEMCFSAGAGNTEPPPSNSHMGDDGTSPLLSCSSCSLQVHSSCYGVRPDTVHN
GAWKCLRCTALAWTADCCLCNLRGGALKMTTDNRWVHVICAIAVAEARFVNAVEREPVDI
SAIPENRKSLKCVYCHKNTKQMCGACIQCSHDSCSTSFHVTCAHIAGVLMKPADWPYVVS
VTCHKHKKTNHKARAGPRGEFSLGQKVIGRNSDGWFYPCTIIGMASHTFYEVNYDDGSYC
DNLFPENIVSHDCLRNGPPEMGELMLVHTVEGKALNASYVRDHVHKHYQVEFQDESQLLL
KQTEIHSLEQDLPKRVCARLAIPTQEGVMSGDEPQAAKRPRLPAPHPPPQALMDSTQQHL
GRHLTATAPAPHSITPTTPSHVPAPPNTDISAPTLTQALAIPIPEPTLNPMPALPDPCLA
DHLPAAPLLPLSPDMPSQHQGEVYTPSSSYVSYMETLLNAHFPPQEKGPGPLF
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgtcattgacagtgcccccagatccaactgccaccatgtcgctggaagcgtcaacccca
gcgccagacctagccccagcaccagacctagccccagcaccagacctagccccagcacca
gacctggtcccagatccagccccagacctagctcctgaattaaccccagattcagctcaa
gccccagagctagcctcagatccagcccctaccccagctcctccagtcccagtcatgaac
ccggggtgtaagatcatgaccttccggccaaccatggaggaattcaaggactttgccaaa
tacgttgcctacatggagactcaaggagcacaccgtgcaggcctggcaaaggtgattcct
cctaagggctggaagccgcggcagtcgtacgacaccatcgaggagatggtgatccctgct
cccatcatgcaggtggtgacgggccagtcgggcctcttcacccagtacaacatccagaag
aagtccatgaccgtcggggagtaccgtcaactggccaacagcagaacgtactgtactccc
cgacacaaggactttgacgacctggagaggaaatactggaagaacctcacctttgtttcg
cccatctacggcgccgacgtcagcggctccatctacgacccggagatcggtgagtggaac
atcggccacctgaacacgctgctggacatggtggagcaggagtgtggcatcgtgatcgag
ggggtgaacacgccctacctgtactttggcatgtggaagaccaccttcgcctggcacaca
gaggacatggatctctacagtatcaactacctccactttggagagcccaagtcatggtac
gccgtcccgcctgagcacggcaagaggctggagagactggcgcaaggtttcttcccaggc
agttcccagggctgtgacgccttcctccgccacaagatgactctcatctccccatccata
ttgaagaagtacagcatccccttcgacaggatcactcaggaagaaggcgagttcatggtc
acctttccctacggctaccacgccggtttcaaccacggcttcaactgcgccgagtccacc
aactttgccaccctgcgctggatcgactacggcaagatggcaacgcagtgtacgtgtcgt
aaggacatggtgaagatctccatggacgtgttcgtccgctgcctgcagcccgagcgctat
gagcagtggaaacagggcaaggacggcaccgtgctggaccaccagcgacccaccaccctc
aacagccccgagctggagcactggagggccaaccgggtcacctaccgggagaagctgctc
cagagagctttgcagaagaaggagcagctgcgccggctgaagctggaggaggtcaaggtg
ctggcagaagagggcatcgagctggacgccgtggcctaccagcggcaggtggaggagcgc
gaggcccagcggcggcaggacagggaggagaggatggcccgcgaggccctggagaccctg
gaggccatggatagagaggaccgggagaggcaggaagcccttgccgcccaggccgcaaga
ggcctaccagacccccaggtagacccgcggcacttgacggcgaatggcgagaagaagaag
aagaagaagaagaagaaaaagaagaagaaacaacccgccctgccgtccgaccccatgaac
tctttccaagcagcttttgagaagtttgccacgtttaaaatcccgcagaccccaaagcag
cccaaaggcagcaatgacacagacctaccagcagagggcaagcttgatgtgaacggtatg
cagcagtcatcttactccaagcagctgaagatgaggatggaggtgaaaaagagtcgccgg
caccccctcagcaaaccccccatgcgatccccactctccatcgtcaagcaggagacatct
agtgacgaagcagaacttttctccccctggccactggatggcgacgtgaagaaggcaggc
cacttgtggcagaaccgcacgcccaacttcctggccgagaagggtttcaacgcggccgtg
gccaccctggaaccctactgtgccgtatgcactctgttctgtccgtacacacagaaggac
tcctcctacccgaccaacagtcccggtgcccccaaccaccacagcgtatcccgctgcggc
agccgtacccatccgctggtccccgagatgtgcttcagcgccggggcaggcaacaccgag
ccgccgccctccaactctcacatgggtgacgacggcaccagcccgctgctctcctgctcc
tcctgcagcctgcaggtccactccagttgttatggtgttaggccggacacggtacacaat
ggggcctggaagtgtttgagatgtacagcactcgcctggacagcggactgctgtctgtgt
aacttacggggaggcgctttgaagatgaccacggacaaccggtgggtccatgtgatctgt
gccatcgctgtggccgaggcccgcttcgtcaacgccgtcgagagggagccggtggacatc
agcgccatcccagagaacaggaagagtctgaagtgtgtgtactgccataaaaacaccaag
cagatgtgcggcgcgtgtatccagtgttcccacgacagctgctccacctcctttcatgtc
acctgcgctcacatcgccggcgtgctcatgaagcctgccgattggccctacgtggtgtcc
gtcacgtgccacaagcacaagaagaccaatcacaaggcgagggcggggccacggggggag
ttttctctgggccagaaagtgattggtcggaacagcgacggctggttctacccctgcacc
atcatcggcatggcgtcgcacaccttctacgaggtcaactatgatgacggctcctactgc
gacaacttattcccagagaacattgtgagtcatgactgtcttcgtaacggcccgccagag
atgggcgagctgatgttggtccataccgtggagggcaaggcgctcaatgcctcctacgtc
agggaccacgtccacaagcactaccaggtggagttccaggatgagtcacagttgttactg
aagcaaacagagatccactcgctggagcaggacctgcccaaaagggtctgcgcccgcctg
gcaataccaacccaggaaggtgttatgtcaggagatgaaccacaggcagccaagcggcct
cgcctccccgctcctcaccccccacctcaagccctcatggactcaacgcagcagcacctc
ggacgccacctcacagctacagccccagcacctcacagtattacacccaccacccccagc
catgtgcctgctccccccaacactgacatcagtgcccctaccctcacacaggctctggca
atacccatccccgagcccacccttaacccaatgcccgctctccctgacccctgtctcgct
gaccatctcccagccgcccccctgctgcccctgtccccagacatgccctcccagcaccag
ggcgaagtctacacgcctagctccagctacgtatcctacatggagactctgctcaatgca
catttccctcctcaggaaaagggccccggtcccctgttttaa

DBGET integrated database retrieval system