Oncorhynchus tshawytscha (Chinook salmon): 112250636
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Entry
112250636 CDS
T05605
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112250636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112250636
03110 Chaperones and folding catalysts [BR:
otw03110
]
112250636
04131 Membrane trafficking [BR:
otw04131
]
112250636
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112250636
Chaperones and folding catalysts [BR:
otw03110
]
Heat shock proteins
HSP40 / DNAJ
112250636
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112250636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
112250636
NCBI-ProteinID:
XP_024276725
LinkDB
All DBs
Position
LG01:complement(39803593..39867699)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSLLGGYKKKTCSYDGYESLQLVDSSGNFNNGGGRGSGIGGGSVAATLGGPKAGPLREDD
CSTMDSSGPPSPDMDANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATYT
KGELDIAYITSRIIVMSYPAEALQIGNQNHVEDIRSFLDSRHADHYTVFNLSQRNYRGAK
FSNRVSECNWPPRQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGRAPSGVLVCAMFC
FCHLFSNPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSMVSEKPSLPHSKPLVVKAVTMSP
VPCFNKQRIGCRPFCEVLIGETKIFSTAQDYERMREHRVQDGKVVFPLGVNVQGDVVISV
YHMRNTIGGRLQAKVSNTQILQIQFHTGFIAPGTSVLKFTKPELDACDSPEKYPQLFHVL
VDIEVEGTDKQKDLTPPWEQFPNKDLIPNVLFSCHQEHQDALAIADEMEGLDLEEPSRSH
SGSDSRPHGEDSEPSDDEMLSLSSQQSNASGERHGGAQAGPRGPKRPEQPQALTTAPPPP
EEMDLLGLDGAAVNPPCPKPQPPTTNTTTDLLGDLFGASPQAPPGSGPASAQSTPQKIAP
PSTSPCPSPAFDPFGAGPMPKPQELMGSFRGPAGNLGNLGLPAPLLHAARSPSPTMQNTG
KGRSSPVPLTTPVVTIQQPPNAMGGWDWNKSAAPGGGFGMGSRSASTSPTGSVHSTPTHQ
VKPKTLDPFADIGNLGGSLGGGSGFSSKPTTPTGTTPAFPPMGSPSRPPPSPQHGGGWQA
NTGFPSWQPGGGGGGGQAGWQPQPQGQGQGGPPSQPKPSPSHSMPHTSPSNRPNYNISFS
AMGGGAAPNAAGKPQPNMGTKPKVATANFDDLLSGQGFAGAKKKEGPRTIAEMRKEEMAK
EMDPEKLKILDWIEGKERNIRALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAV
LVVHPDKATGQPYEQYAKMIFMELNDAWSEFDSQGQKALY
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagcctactgggtggctataagaaaaagacctgcagttacgatggctatgaatcttta
cagttggtcgatagcagcggtaacttcaataacgggggagggagaggcagcggaatcggc
ggcggctcggtagcagctaccctaggaggaccgaaggcaggcccactgcgcgaggacgac
tgcagcaccatggacagctcaggtcctccatctccagatatggatgccaactatggcgga
gggctgctggatatggtgaaaggcggagccggcaagttcttcagcaacttcaaagataac
ctgaaggacacactcaaagacacctccactaaagtcatgcaccaggtggccacgtacaca
aaaggagagctggacattgcctacatcacatcacgaatcatagtgatgtcatatcctgcg
gaggcgttgcagatcggcaaccagaaccatgtggaggacatccgctctttcctggactca
cggcacgctgaccactacaccgtcttcaacctgtcacagcgcaactatcgcggcgccaag
ttctccaaccgggtctcggagtgtaactggccgccccgccaggctcccagcctgcacaac
ctgtttgcggtgtgtaagaacatgcacaactggctcaaacagaaccccaagaatgtgtgt
gtcatcacctgctcggatgggcgtgctccctcgggtgtgctggtctgtgccatgttctgc
ttttgccacctcttcagcaacccagtgcccgccatgcagctactcagcgccaagagaccc
ggctcaggcctctggccctcgcaccggaggtacataggctatgtgtgcagtatggtatca
gagaagccctccctgccccactcaaagcccctggtggtcaaggcggtcaccatgagtcca
gtaccctgcttcaacaaacaacgcatcggctgcagacctttctgtgaggtcctcataggg
gagacgaagatcttctctacggcacaggactatgagaggatgcgagagcacagggtccag
gatgggaaggtggtcttccctctaggtgtgaatgtccagggtgatgtggtcatctctgtc
tatcatatgagaaacaccataggaggacgactgcaggccaaggtgtccaacacccagata
ctccagatccagttccacacaggcttcatcgctccagggacaagcgtgttaaagtttaca
aagccggagctggatgcgtgtgactctccagagaagtacccacaactgttccatgtgttg
gtggacattgaggtggagggtacagacaagcagaaggacctgacccctccctgggaacag
ttccctaataaagacctgatccccaacgtactgttctcatgtcaccaagagcaccaggac
gccctcgccatcgcagatgagatggagggactggacttggaggagccaagccggtcccac
agtggttcagacagtcgccctcacggggaggacagtgagccgtctgatgatgagatgctg
tccctgtccagccagcagagcaacgctagcggagagcgacacggaggggctcaggctggc
cccaggggccccaagagaccagagcagcctcaggccctcaccactgctcctcctccccca
gaagaaatggacctcctgggcctggatggggctgctgtgaaccccccctgccccaaaccc
cagccccccaccaccaacaccaccacggacctcctgggggatctgtttggagcctccccc
caggccccgcctgggagtgggcccgcatcggcccagtccaccccccagaaaatagcccct
ccctccacctccccttgcccctccccagcattcgacccatttggggcgggtccgatgccc
aagccccaggagctgatgggttccttccggggtccagcaggtaaccttggtaacctgggg
ctgcctgcccccctcctgcatgcagctcgctctccgtcccccactatgcagaacactggc
aagggacggagctccccagtcccgctcaccacccctgtggtcaccattcagcagcctccc
aatgccatgggaggatgggactggaacaagtctgcagctccaggagggggttttggtatg
ggcagtaggtcagccagcaccagtcctaccggatcagtccacagcacccccacacaccag
gtcaaacccaagaccctggacccattcgctgatattggaaacctggggggcagtctggga
ggaggctctggcttctccagtaagcctaccacccctacaggcaccacccctgccttccca
cccatgggctccccctcacggcctcctccctcgccccagcacggtgggggctggcaggct
aacacaggcttcccctcgtggcagcccggtggtggcggtggtggagggcaggcagggtgg
cagccccaaccccagggtcagggtcagggtggcccaccctcccagcccaaacccagcccc
agccactccatgccgcacacctccccctccaacagacccaactacaacatcagtttctct
gccatgggaggaggggctgctcccaatgcagccgggaaaccacagcccaacatgggtacc
aagcccaaagttgcaacggctaacttcgatgacctgctgtctggccaaggctttgctgga
gccaaaaagaaggaaggtcccaggacaatagcagagatgaggaaggaggagatggctaaa
gagatggaccccgagaaactcaagattctggattggatcgaggggaaggagcgtaacatc
cgggccttgctgtccaccatgcacacagtgctctgggagggggagacccgctggaagcct
gtaggcatggctgacctggtgaccccagagcaggtcaagaaggtttaccgcaaagccgtg
ctggtggtccatccagacaaggccacgggacagccctatgaacaatatgccaagatgatt
tttatggaactgaatgacgcctggtcagaatttgacagccaaggacagaaagcactctac
tga
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