Oncorhynchus tshawytscha (Chinook salmon): 112250688
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Entry
112250688 CDS
T05605
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112250688
03041 Spliceosome [BR:
otw03041
]
112250688
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112250688
mRNA cycle factors
Stress granule specific factors
112250688
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
General mRNP proteins
112250688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
BRAP2
RRM_3
WI12
Motif
Other DBs
NCBI-GeneID:
112250688
NCBI-ProteinID:
XP_024276809
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All DBs
Position
LG05:47595723..47614059
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AA seq
374 aa
AA seq
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MAVRRGHIRYLKVCEVQSCQGDNRESQRHGSKGSINIKQVVYDNDYDEHMADEPKDAKTN
LIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYHKNQSHSLGYGFVNYVNASD
AERAINTLNGLRLQSKTIKVSFARPSSDGIKDANLYISGLPKTMTQKDVEDMFTRYGQII
NSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAANPNQAKNS
QVINQLYHNQGRRFGGPVHHQAQRFRFSPMSVDHMSSMSTVSAEGNSTAGWCIFIYNLGQ
DADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDK
ILQVSFKTSKGGHK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggacacatcagatacctcaaagtgtgtgaggtacagagttgtcag
ggtgacaacagggagtcacagcggcatggaagtaagggttcaattaacataaagcaagta
gtttatgataacgattacgacgaacacatggcagatgagcctaaagatgccaaaaccaac
cttatcgtcaattacctgccccaaaacatgagccaggacgagttgcggagtctcttcagc
agcatcggagaggtggagtctgccaaactcatccgcgataaagtggcaggtaatccctat
cacaaaaaccagagccacagtttagggtacggatttgttaactatgttaacgctagtgat
gcagaaagggctatcaataccctcaatgggctgagactacagtctaaaactatcaaggtg
tccttcgccaggccgagctctgacggtattaaggatgccaatctttacattagtgggctg
cccaagaccatgacacagaaagacgtggaggatatgttcacacgctatggccagatcatc
aactcgcgtgtcttggtcgatcaggcctcaggcctgtccaggggtgtggccttcatccgc
tttgacaaacgggctgaggcggaggatgccatcaaagacctgaacgggcagaaaccccct
ggggcctcggagcccatcacagtgaagtttgctgccaaccccaaccaggccaagaactcc
caggtcatcaaccagctctaccacaaccagggtcggcgctttgggggcccggtacaccac
caggcccagagattcaggttctctccgatgagtgtagaccacatgagcagcatgtctacg
gtcagcgctgaagggaactccacggccggctggtgtatcttcatctacaacttgggccag
gacgctgacgagggcatcctgtggcagatgttcgggcccttcggagccgtcaccaacgtc
aaggtcatccgcgacttcaacaccaataaatgcaaaggcttcggcttcgtcaccatgacc
aactacgaggaggcggccatggccattgccagcctcaacggttaccggcttggagacaag
atactgcaggtttccttcaaaaccagcaaggggggtcacaagtaa
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