Oncorhynchus tshawytscha (Chinook salmon): 112250714
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Entry
112250714 CDS
T05605
Name
(RefSeq) survival motor neuron protein isoform X1
KO
K13129
survival motor neuron protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112250714
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
112250714
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_Tudor
CART
SMN_YG-box
SMN_G2-BD
Motif
Other DBs
NCBI-GeneID:
112250714
NCBI-ProteinID:
XP_024276849
LinkDB
All DBs
Position
LG05:48436839..48456795
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AA seq
342 aa
AA seq
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MDEYYESIVFRSERVEDNVSLAVSTDDSALVKAYEDALRTFRRAEKESGEKLADNPQTLS
ESYVPTKGPVDPKTNSKVWRLGYRCRAVYSEDGLVYPAVLVWLRGERCRVKFEGYGNEEE
LELSSLLSPVELGGHRGRVDAKVQQGAVDGFSSTSNNIADWKRMERDWRTAQQEGREELS
SPQPSKFAPVSLGAVPSVSGHLEYIVDQWPCFTEGKDYGKCSYDFGKEHGDKKKPSGRRE
VPNNHPFSFFPPVPKESLDFLPPPPPPCVWPPRAVLADASNGLDSAVTDISSMLLSWYLC
GYHTGCYMCDADQQCAVSKGARIGKLCECSQGTRESRMTATI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatattatgaaagtattgttttccgaagtgaaagagtcgaggataacgtgtct
ttagctgtgtctactgacgactccgcactggtaaaggcctatgaagacgccctccgaaca
tttcggagggctgaaaaagagagcggtgagaagcttgcagacaatccgcagacgctgtct
gaatcatatgtgccgaccaaaggaccagttgacccgaagaccaactcaaaggtatggagg
ctgggataccggtgtcgtgcggtgtactccgaggatggcctggtctacccagcggtgctg
gtgtggttgagaggcgaacgctgccgggtgaagtttgaaggctacgggaatgaggaagag
ctggagctgagcagcctgctatctccagtagaactgggaggccacagaggaagagttgat
gccaaagtgcaacaaggagctgttgatgggttcagctccactagtaacaacattgctgat
tggaagaggatggaaagagattggaggacagctcaacaagagggacgagaggagctgtcc
tcacctcagccatctaagtttgctccagtgagtctgggtgctgttccctctgtttcagga
cacctggaatacattgttgaccaatggccatgctttactgagggaaaagattatggcaaa
tgcagctatgactttggcaaggagcatggggataagaagaagccaagtggccggcgagag
gtaccaaacaatcaccccttttccttctttcctccagtgcccaaggagtctctggacttc
ctgcctcctccacctccaccgtgtgtatggcccccccgagcagtgctggccgatgctagc
aatgggctagactcagccgtgacagacatatccagcatgctcctgtcctggtacctgtgt
ggctaccacaccggctgctacatgtgtgatgcggatcagcaatgtgcagttagcaaaggt
gcaagaattgggaagttgtgcgagtgttcacagggaacgagggaatcgaggatgacagct
accatctga
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integrated database retrieval system
