Oncorhynchus tshawytscha (Chinook salmon): 112250720
Help
Entry
112250720 CDS
T05605
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112250720 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112250720 (grin3bb)
04082 Neuroactive ligand signaling
112250720 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112250720 (grin3bb)
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112250720 (grin3bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
112250720
NCBI-ProteinID:
XP_024276865
LinkDB
All DBs
Position
LG05:complement(48694397..48800354)
Genome browser
AA seq
1162 aa
AA seq
DB search
MNLIFSRFLAYFYFGFQVILQFFIDPCHLHPQPCHILAQIGHTVRLGALLPTRQPARVQA
ALNRALTGLVQTGDNFLPYNLSLEVVPREPANGDPESLFRCVCQAIVVQGVSAVLAFPQT
QEEIVQVEFMASFLEIPFISIIEHGEPLKTQNRFHLQMVTRIPPSGLSELLLTILQRSGW
QEGMAVLCQGWEEAGLLELLELQSRLGWGATRWHLRALLNLTRAGPTKSEIQDFLSEHFR
GQGPSQILPPAAVLLFGADPECAAAVLRSAQDLGLTLPTVHWVLGYPLSPDTLHSIGLPL
GLLAYGEVERKPLDFYIRDALQLVGQAVAAATVVRPDLALIQNMVNCYDKPNKHEVPSSG
QYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLRRDAVGQPTWVTVGSWEGGRL
KVEDQSLWQGPNGKGHDRGEGQRSGGRWQPGMPVADSRVRVVTLVEHPFVFTREVDEDGN
CPAGQYCLDAGTNSSDMLESYFSERASGNSTFLPTDYSKCCYGYCIDLLEKLAEDLRFEY
DLYIVGDGKYGASKSGRWTGLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSLGI
LVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRVFS
YSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFE
ELSGIHDAKLHHPSHGFRFGTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLKVD
PPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTNNVSEFISRYK
SDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEHAF
YHMVLPRIRRRQKYKYWLHTSQKIHRALNQTYEDVKKKQDTNTEKSSCCIQKNQHPQPPP
DPLLSRASAKWNSENSRDAAAAKDNKRVHFNLETLNSRRLLARAVTKSEGDRGGEGIPGA
NQATRVCANGGFGTSFANLVLSLPSASSSSIPSSSSSLGIPPRPGELQELQEKIDLIRDQ
LRTALARRAELQTSLAKEKAACSAPIVSGMPPVVLAAASLPTSTKTTSSLPSTRCATTMT
DPVLKALPTVRTAPAKHTNEKR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttctcaagattcttggcatacttttacttcggattccaagttattcta
cagttcttcatcgacccttgtcacctccatccccagccgtgccacattctggcgcagata
ggacacaccgtgcgccttggtgcccttctgcccacccgccagccggccagagtgcaggct
gccttgaaccgcgccctcaccggtctcgttcaaactggggacaactttctaccttacaac
ctgagcctggaagtggttcctcgagagccggccaacggagatccggagtcccttttcagg
tgtgtttgtcaggctatcgttgttcagggggtctccgctgttctcgccttcccccagacc
caggaagagatcgtacaagtggaatttatggcttcttttttggaaatcccttttataagc
atcattgaacacggagagcctctgaaaacacagaaccgcttccacttgcagatggttacg
cggatccccccgtcaggcctgtcagagctgctgctgactattctccagcggagtggctgg
caggagggcatggctgtgctgtgccagggctgggaggaggctggcctgctggaactactg
gagctccagagccgccttggctggggcgccacccgctggcacctccgagccctcctcaat
ctcacccgggccgggcccacaaaatccgaaatccaggacttcctttcggaacacttccgg
ggacaggggccaagtcagatcctgccaccggccgcggtactgctgttcggggccgaccca
gagtgtgcagcggcggtgctgcggagcgcccaggacttggggctgacgctgcccacagtg
cactgggtgctgggctacccgctgagccccgacaccctgcactccatcggcctgcccctg
gggctgctggcctacggtgaggtggagcgcaagccgctggacttctacatccgcgacgcg
ctgcagctggtgggccaagctgtggcagcagccacagtcgtgcgtcccgacctggcgctc
atccagaacatggtcaactgctacgacaagcccaacaagcacgaggtgccctcgtccgga
cagtacctcgccagattcctgtctaacacgtcgttctcggggctgacagggccggtgtcg
gtgcagaggaacctgtcccgggttctcacctctcagcgcttccacatctggagcctgcgg
cgggatgcggtgggccagcccacctgggtgacggtgggcagctgggaggggggccgcctg
aaggtggaggaccagagcctttggcagggtcccaatggcaagggccacgaccggggggag
ggccagaggagtgggggccggtggcagccaggcatgcctgtggcagacagccgggtgcgg
gtagttaccctggtggagcacccctttgtattcacgcgggaagtcgatgaggacgggaac
tgcccggcgggacagtactgcctggacgcagggacgaacagctcggacatgctggagagc
tacttcagcgagcgtgcctcgggaaactctaccttcctgcccacggactacagcaagtgt
tgctacggatactgcattgacctgctggagaaactggccgaggacttgcgctttgagtac
gacctgtacatcgtgggtgacgggaagtatggagcgtcgaagagcggccgctggacaggg
ctggtgggcgacctgctcaatggcgtggccgacatggccgtcacctcattcagcattaac
tcagtacgtagccgcgtcatcgacttcacctcgcccttcttctccacctcactaggcatc
ctggtgcgcagcaaggacacagcggcgcccattggcgccttcatgtggccccttcactgg
tccatgtgggtgggtatcttcgtggcactgcacatcaccgccctcttcctcaccctctac
gagtggaaaagcccttttggcatgacgccacacggacgcaaccgcctgcgggtcttctcc
tactcgtcggcgctcaacctgtgctacgccatcctgttcggccgcacagtctccagcaag
actcctaagtgctggacgggtcggtttctgatgaacctgtgggccatcttctgcctgctg
gtgctgtccagctatacagccaacctggccgccgtcatggtcggcgagaagaccttcgag
gagctctcggggatccacgacgccaagctccaccatccgtcccatggtttcaggtttggg
acggtgagggagagcagtgccgaggagtacatgaagaagagtttcccagagatgcacgag
tacatgaggcgctacaatgagcccaccacacctgatggagtgtccaccctcaaggtagat
ccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtgtccatc
gacgcagactgcaagctgctcaccgtgggcaaacccttcgccatcgaaggctatggaata
ggcctcccgcaaaactcccctctgaccaacaacgtgtcagagttcatcagtcgctacaag
tcagacggctacatggacatgctgcacgacaagtggtacaaggtggtgccctgtgggaag
agggtgttcgccgtcaccgagactctccagatgggcatccgtcacttctcagggctgttt
gtgctgctgtgtgtgggcgtggccacgtcgctgctcaccctggctggggagcacgccttc
tatcacatggtgctgccccgcatccgacgacgacaaaagtacaagtactggctccacacc
agccagaaaatccaccgagccctgaaccagacctatgaggacgtgaagaagaagcaagac
accaacacagagaaaagtagctgctgcatccagaagaaccagcacccccagcctccccct
gaccctcttctctccagggcatcggccaagtggaacagcgagaacagcagggacgctgca
gccgctaaggacaacaagcgcgtccactttaacctggagaccctcaacagccgccgcctg
ctggcccgggccgtgaccaagtccgaaggggacagagggggggaaggtatccccggggct
aaccaggcaacacgtgtctgtgcaaatggaggcttcgggacttcctttgccaacctggtg
ctctccctcccctccgcctcttcttcatccatcccttcttcatcttcctccttgggcatt
cctccaaggccaggggagctacaagagctacaggagaagatcgacctgatccgggatcag
ctaaggacggctctggccaggagggctgagctgcagacttccctggccaaggagaaggcc
gcctgctctgcacccatagtgtcaggaatgccccccgtggttttagctgcagcatccctc
cccacctccaccaaaaccacctcgtccctcccctccacccgctgtgccaccaccatgaca
gaccctgtcctcaaggccctgcccacagtccgcacagcccccgccaaacacaccaacgag
aagaggtga
DBGET
integrated database retrieval system
