Oncorhynchus tshawytscha (Chinook salmon): 112250773
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Entry
112250773 CDS
T05605
Name
(RefSeq) nicalin-1 isoform X1
KO
K26499
BOS complex subunit NCLN
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112250773
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250773
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
112250773
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
112250773
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
Nicastrin
Motif
Other DBs
NCBI-GeneID:
112250773
NCBI-ProteinID:
XP_024276955
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All DBs
Position
LG05:50661220..50679190
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AA seq
575 aa
AA seq
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MFEEASEVFDNMFKSSFPLTFIVFIPAVLILVSPLPAEAAHEFTVYRMQQYDLQGQPYGT
RNAILNTEARTVEAEVLSRRCVIMRLVDFSYERYQKALRQSAGAVVIILPKNMSTMPQDI
VQQFMELEPEMLATETIVPVYFALEDDELLSIYTQTLTSSSSQGSSSAAEVLIHTATANG
FQMVTSGAQSKAVSDWAITSLEGRLAGTGGEDLPTIVLVAHYDSFGVAPWLSYGADSNGS
GVSMLLELARLFSRLYTYKRTHAGYNLLFFVSGGGKFNYQGTKRWLEDNLDHTDSSLLQD
NVAFVLCLDTLGNGDSLHLHVSKPPKEGTAQYALLKELETVASNQYPEVKFSMVHKKINL
ADDTLAWEHERFGIRRLPAFTLSHLNSHREVQRSSIMDVRSVSSEHGAGEPPAGPHVDLR
KLSRNTKLIAESLARVIYNLTEKGAPGDLQIFTEQMQMQEEQLSSVVDWLTAQPRAAQLV
DKDSSVVSTLEYHLGRYLKDVRRHYVKADKRDPEFVFYDQLKQTMNAYRVKPAIFDLLLA
FCIAAYLGVIYLSIQHFVVLYSVVRRITTPKTKQH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggaggctagtgaggtgttcgataacatgtttaagtcctctttccccctgact
ttcattgtgtttatccccgcggtactgattctcgtctcaccccttccagccgaagcggca
catgaattcaccgtgtaccgcatgcagcagtatgacctgcagggacaaccgtacgggacc
aggaatgccatattgaacacagaagcgcgcacagtggaggcggaagtgctaagccgccgc
tgtgtcatcatgcggctggtggacttctcctatgagagataccagaaagccctgcgccag
tccgctggggctgtggtcatcattctccccaagaatatgtccaccatgccgcaggacata
gtacagcagttcatggagctggagccagagatgctggccacagagaccattgttccggtt
tactttgctctggaggatgatgagctgctctccatctacacacagaccctcacctcctcc
tcctcccagggctcctcctctgcagctgaagtgctgatccacacagccacagcaaatggc
tttcagatggtgacgagtggggctcagagcaaggcagtgagtgactgggccatcaccagt
ctagaggggcgactggctggaactgggggagaggacctgcccaccattgtcctggtggct
cactatgactcctttggtgtcgctccgtggctgtcctatggagcagactctaacggcagt
ggggtgtctatgctgctggagttagccaggctcttctccagactctacacctacaagagg
acacacgctggatacaacctgcttttctttgtctctggaggagggaagtttaactaccaa
ggcaccaagcgctggctggaggacaacctggaccatacagactctagtctgttgcaggac
aatgtggcatttgttttgtgtctggacaccctggggaacggggacagtctgcaccttcac
gtgtccaaaccccctaaagagggaaccgcccagtatgccctgctcaaagagctggagact
gtggcgtccaaccagtacccagaggtcaagttctcaatggtgcacaagaagataaacctg
gcggacgacacgctggcgtgggaacacgagcgcttcgggatccgccggctgccggccttc
acgctgtcccacctcaacagccaccgcgaggtgcagcgctccagcatcatggacgtgcgg
tcagtgtcttctgaacatggagcgggagagccccctgctggacctcatgtggatctgaga
aagctcagcaggaacacaaagctgattgcagagtcgctggccagagtcatctacaacctc
acggagaagggtgccccaggtgacctacagattttcactgaacaaatgcagatgcaggag
gagcagctgtcgtcggtggtggactggctgacagcccagccgcgggctgcccagctggtg
gacaaggacagcagcgtggtcagcaccctggagtaccacctgggacggtacctgaaggac
gtccgcaggcactacgtcaaggctgacaagagagacccagagtttgtcttctatgatcag
ctcaaacagaccatgaatgcttacagggtgaaaccagccatctttgacctgcttctggca
ttctgcatcgcagcttacctcggagtgatatatctgtccatccagcactttgtggttctc
tacagtgtggtgcgcagaatcacaacgcccaagaccaagcagcattaa
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