Oncorhynchus tshawytscha (Chinook salmon): 112250782
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Entry
112250782 CDS
T05605
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112250782
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112250782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112250782
NCBI-ProteinID:
XP_024276972
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All DBs
Position
LG05:50814592..50834649
Genome browser
AA seq
1024 aa
AA seq
DB search
MAASNYYGFTHGAGPQYSVQPPPAFAHPTTASYSVQPAPAVAHAVTASYAPAPAQAARPV
ASAPYLAAYQTHPAPPDYGYRQPDPTPQPTTTPQAYQLPVYTETDNYSYGRPPAVTSYET
KQYYQTSIAPAQRTPTEAYYQTGVKSGYSPVSTVYSQPPPPQRQVTALKPLAPASSVSTS
YNIYPVSTSVQQPPTPISSYTPCSSFNSTAATSYSGISYSTYDSSGYTSTPSYYQPAQLP
APQPPPQQPQPSMQLPHKQLTSSSWSNAGSNMVTAPTVNAYKKPMFHQNRLQKPKGPPKQ
PQLHYCDICKISCAGPQTYREHLEGQKHKKKEAALKSGSAVGSNGPRGIQTQLRCELCDV
ACTGVDAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPILVNNAPIISTSTAGKTTPIVVTS
TAPVAPPKPVIVNAVKAPAPVKKQITPKITLLANKLATPPSAKVDEDKQLATASKSETTS
DDEDGEGVGGQGDVQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDMHLKGRRHR
LQYKKKVNPELPVEIKPSNRARKLQEGKLRKQKQKAVLKRQRDDEQRWHLEMRSEPDSSW
HTEMRRYEEDMYWRRMEEDQLYWGEQRRRMPPPPLMSRPGMPVPPLLQPVRRPDSPDDRH
IMAKHSTVYPVEEELQAVQRIVSHSERALKLVSDSLLEKEPPAVAPKTDTEADAGEKGPD
TQAARMLKGVMRVGILAKGLLLHGDRNVELILLAAKKPTLSLLKDIAEQLPKELTTFSED
QYEVQAHPEEANIVIFSSKEPKMQVTISLTSPLMREDPAPEKEEKAGDKAAEKGVPEKDP
PDVLNQRKCLEYLAALRHAKWFQARANGLQSCVIIIRLLRDLCQRVPTWGKMPAWAMELL
VEKAISSATGPLSPGEAMRRVLECIATGILLPDGPGLLDPCEKAQTDALGSMTKQAREDI
TASAQHALRLLAFRQIHKVLGMDSLPASKASARNRKRRRDGSETGEGEGEGKKDKKEDAE
EVDA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaattattatgggttcactcatggtgccggtccgcagtacagcgttcag
cctccaccggcctttgcccaccccaccacagccagctacagtgttcagccggctcctgcc
gtggcccatgcagtgaccgcctcctatgcccctgcccctgcacaagcagccaggcccgtg
gcctctgccccttacctggcggcctaccagacccaccctgcccccccagattatggctat
cggcagccggaccctacgccccaaccaaccaccaccccacaggcgtaccagctaccggta
tacaccgaaacggataactacagttacggacgcccacctgcagtcactagttatgagact
aagcagtactaccagacaagtatagctccagcccagcggacaccaacagaagcttactac
cagacaggtgtgaagagtggctacagtccggtcagcacagtgtacagccagccccctcca
ccacagaggcaggtcacagctttaaagcctctggcccccgctagctcagtgtccaccagc
tataacatctacccagtgtccaccagtgttcagcagcctccaactcccatctcgtcttac
accccttgctcctccttcaactccacagctgccacctcctactcgggcatcagctactct
acttatgactcgagtggctacacttccaccccctcctactaccaacctgcacaattgcct
gctccccagccgccaccccagcagccccagccgtccatgcagctgcctcacaagcagctc
accagctcttcctggagcaatgcgggcagcaacatggtgaccgctcccacagtcaacgcc
tacaagaagcccatgttccaccagaacaggctgcagaagcccaaagggccacccaagcag
ccccagctgcactactgtgacatctgcaagatcagctgtgctggcccgcagacgtaccgg
gaacacctcgagggccagaagcacaagaagaaggaggctgctctgaaatctggcagcgcg
gtggggagcaacgggccccgggggattcagacccagctgcgctgtgaactatgtgacgtt
gcctgcactggcgtagacgcgtacgctgcccatatccgaggggccaagcaccagaaggtg
gtgaagctccacaccaaactaggcaaacctataccgtcaactgaacccattttagtgaac
aatgctccgattatctcaacgtcgaccgctgggaagacgacccctattgtcgtcacgtca
actgcccctgtagccccacccaaaccggtgatcgtaaacgccgtcaaggccccagcacct
gtgaagaagcaaatcacacccaaaataacccttcttgccaacaagctggccacccctcca
tcagccaaggtggatgaggacaaacagttagcaaccgcttctaagagcgagaccacgagt
gacgatgaggacggggaaggagtgggggggcagggggacgtccagcctgtgggacatgac
tatgtggaggaggtgcgtaatgatgatgggaaggtgattcgcttccactgtaaactctgt
gaatgcagtttcaatgaccccaacgctaaagacatgcacctaaagggacgcaggcaccgg
ctgcagtacaagaagaaggtgaacccagagctgccggtggagatcaagcccagtaaccgg
gccaggaaactacaggagggcaaacttaggaaacagaaacagaaggctgtgctgaagaga
cagagggatgatgagcagcgctggcacttggagatgaggtcagagccagacagcagctgg
cacacagagatgaggcgctatgaggaggacatgtactggaggaggatggaggaggatcag
ctatactggggggagcagagacgcaggatgcccccccctccactcatgagccggcctggc
atgccagtgccacccctactgcagcccgtgcgtcggccagactccccagacgaccgccac
atcatggccaaacactccactgtctaccctgtggaggaggagctgcaggcggtgcagagg
attgtgtcccactctgagcgagccctcaaactggtgtctgactccctgctggagaaagag
ccccctgctgttgctcctaagactgatacagaggctgatgctggcgagaaaggacctgac
actcaggcggcccgtatgctgaagggggtgatgagggttggcattctggccaagggcttg
ctgctccacggggacaggaacgtggagctcatcctgctggctgccaagaagcccaccctc
tctctactgaaagacatcgctgagcagttgcccaaagaactgacgacattttctgaagat
cagtatgaggtacaggctcaccctgaggaagccaacatcgtgattttttcgagcaaggag
ccaaaaatgcaggtcaccatctctctaacttcgccgctgatgagggaggaccctgcccct
gagaaggaggaaaaggcaggagacaaagcggctgagaaaggggtgcctgagaaagaccct
cctgatgttctgaaccaaaggaagtgcctggagtacctagctgctctgagacatgccaag
tggttccaggctcgtgccaacggtcttcagtcctgtgtgatcatcattcgactgttacgg
gatctgtgccagcgagtgccaacctggggcaagatgccagcctgggctatggagctgctg
gtagagaaggccatcagcagtgccacagggcccctcagcccaggggaagctatgcgtagg
gtcctggagtgtatcgccacgggcatcctactgccagacggtcctgggctgctggacccc
tgtgagaaagcccaaaccgatgctctggggagcatgaccaagcaagcccgggaagacatt
actgccagcgcgcagcatgctctgcgactgctggcgttccgtcagatccacaaggttctg
gggatggactccctgccggcgtccaaggccagcgctcggaaccgcaagcgcagacgggat
gggagcgagacgggagaaggagagggggagggaaagaaagacaagaaggaggatgcagaa
gaggtggatgcttga
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