Oncorhynchus tshawytscha (Chinook salmon): 112250801
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Entry
112250801 CDS
T05605
Name
(RefSeq) cilia- and flagella-associated protein 57-like
KO
K24729
cilia- and flagella-associated protein 57
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112250801
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
112250801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WDR55
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ATG16
CC4_CEP85
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
VPS11_N
DUF1912
Motif
Other DBs
NCBI-GeneID:
112250801
NCBI-ProteinID:
XP_042177453
LinkDB
All DBs
Position
LG01:41414265..41440040
Genome browser
AA seq
1215 aa
AA seq
DB search
MSAVVAQCHYSFGLQRGVANNLFYFDEQTVIFPSGNNCVRYNIDQKWQRFIPGLERSQGM
YALAISSNRRYLAVSERGERATITVYDLQHEQSRKRKVLNGGDIHVQEFVSMAFSTDSKY
FIGQSGAPDYTLFYWMWEKQKVMAMVKTTVATNPVNQVSLNPYDNTQICVSGNGVLKLFR
YAEGVLKQSTFHKQETHNFLSHAWMSEERVIAGTEAGRLMVFESGDLRWDMSVTTKTAMS
QDPDSAEGNDEETPQLPRVTVITAYSKGFACSAGPGTVYLFERTDDKDNYRKTREIRIPP
DQCSHEPSHAEQQQIVSLVISPSEETVVTSTDRGQLYSITLSSAEMSKGEQVQFEFLSHS
FHSGPITGLSVCIRKPIIATCSLDQSVRIWNVETNTLELYKEFQEEAFSIALHPFGLFVM
VGFSDKLRLMNLLIDDVRTFKEFTVRACRECAFSHGGHLFAAVNGNIIHIYSTTTFENVL
NLKGHNGKVRSIAWSGDDSRLVSCGMEGAVYEWNTLTSKRESESVLKSCSYTSVTISPDA
KTIFAVGTDCTLKEIQACQILREVPAEDVAYTTIAMSRSGRTLFTGTSIGTIRAIKYPLS
TQKDWIEYQAHSSPVTKMVITFDDQYLLTVSEDGCLLIWKIIDKEGRGLKRDKEITYAEE
ILITKSDLEEKNQVMLELKTRVEELKMENEYQLRLKDMNYNEKTKELSTTFVRQMESLKT
NIQILKTERDNMEVANQETMFEVMEKHSKELQDMESANSQKLMLEYEKYQELQFKSQQMQ
QDYEKQLQQMDENKTAALEELTLYYEGKMQEKLLVLEQCQEESRIQAREFEESRKQMEED
GDREIQDIRVRYERWLRDERETNMRMKRDTGIMKKKFSSLQKDIDNSNVEMERMKLEQQK
LQAIVKSLEKDILALKKAIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQ
IEPRENDIKEMKEQIHEMEEELDTFHKKNTQGELDIAELKLKLTTTDKEMHKGLQKVRDV
EALVRRFKTDLHNCVGFIQEPKRLKESIRDLYDRYTQQSDVLDKVSVDPNVQREYARQRD
HLERNVASLKRKLAQDSVVHHADNVKIMQENVTLISEVNDLRRQLHLARSQVYDYKSLMG
KKGLKQTNTLKALLSPRANPSNMVVRLNEEDEGDRIIQLQRLEIQRLREEIQVLMKIHPY
RPPSTAKLPSLQTNT
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtggtggcccagtgccactacagctttggtttgcagaggggcgtggccaat
aacctgttctactttgatgagcagactgtcatcttcccatctgggaacaactgtgttcgt
tataacattgatcagaaatggcagaggttcatcccaggtttggagaggagtcagggaatg
tatgccctggctatcagctcaaaccgccgctacctggcggtgtcggagcgtggagagagg
gccaccattacggtgtacgacctgcagcacgagcagagccggaagaggaaggtgctgaat
ggaggggacatacatgtccaggagtttgtctccatggccttctccaccgactccaagtac
ttcattggccaatcaggagcgccagactacaccctcttctactggatgtgggagaagcag
aaggtcatggccatggtgaagaccactgtggccactaatccagtcaaccaggtcagcttg
aacccatacgacaacacccagatctgtgtgagtgggaatggggtcttaaagctgttccgc
tatgcagagggggttctgaagcagtccacctttcataagcaagagacccataacttccta
tcccatgcctggatgtctgaggagagggtgattgcagggacagaagctgggaggctgatg
gtgtttgagtctggagacctccgatgggacatgagtgtgaccaccaagaccgccatgtca
caggacccagacagtgcagagggaaatgatgaagagacccctcagttgccacgggttaca
gtcatcacagcttactcgaaaggctttgcgtgctcggccggtcctgggactgtgtatctg
tttgagagaaccgacgacaaggacaactacaggaagaccagggagatcaggatcccccca
gaccagtgcagtcacgagcccagccatgcagagcagcagcagatcgtctctctggtcatc
agtccatcagaggagacagtagtgaccagcacagatcgtggtcagctctacagtatcacc
ctgtcctctgctgagatgagcaagggggagcaggtccagtttgagttcctgtcccactct
ttccactctgggcctatcaccggcctgtccgtctgcatccgcaagccaatcatcgccacc
tgctccctggaccagtctgtacgcatttggaacgttgagaccaacaccctcgagctgtat
aaggagttccaggaggaggcgttcagcatcgccctccacccgtttggcctgtttgtcatg
gtgggcttctctgacaagctgcgactcatgaacctgctcatagacgacgtcaggaccttc
aaggagttcaccgtgcgagcctgtagagagtgtgccttcagtcacggaggacacctgttt
gctgcggtcaatggaaacatcatccacatctactccaccaccacgttcgagaacgtcctc
aacctcaaaggacacaatgggaaggtgcgctccatagcctggagtggtgatgacagcagg
ctggtgtcgtgtggtatggagggggctgtgtacgagtggaacaccctgaccagcaagcgg
gagtcggagagcgtcctcaagtcctgcagctacaccagcgtcaccatctcccctgacgcc
aagactatcttcgccgtggggaccgactgtaccctgaaagagatccaggcctgtcaaatc
ctacgtgaagtgcccgctgaagatgtggcttacaccaccatcgctatgtcccgttctggg
cgcacgctcttcactgggacctccatcggaaccatcagggccatcaagtaccccctgtcc
acccagaaggactggatcgagtaccaggcccactcttcacctgtcaccaagatggtgatc
acttttgatgaccagtacctactgacggtttctgaggacggctgtctgctcatctggaag
atcatagacaaggagggccgcggcctgaagagagacaaggagatcacctacgctgaggag
atcctcattaccaagtcagacctggaggagaagaaccaggtgatgttagagctgaagaca
cgtgtggaggagctgaagatggagaatgagtaccagctccgtctgaaggacatgaactac
aacgaaaagaccaaggagctgtcaactacatttgttcggcagatggagtcgctcaagacc
aacatacagatcctgaagacagagagagacaatatggaggtagctaatcaggagaccatg
ttcgaggtcatggagaaacactccaaagagctgcaggatatggaatcggccaacagtcag
aagctgatgctggaatatgagaagtaccaggagctgcagttcaagtctcagcagatgcag
caggactacgaaaagcagctgcagcagatggacgagaacaagactgctgccctggaggag
ctcaccctctactacgagggaaagatgcaggagaaactactggtgctggagcagtgccag
gaggagtctcgtatccaggcgagggagtttgaggagagcaggaagcagatggaggaggat
ggggacagggagatccaggacatcagggtccgctacgagaggtggctgagggacgagagg
gagaccaacatgcgcatgaagagagacaccggcatcatgaagaagaagttcagcagcctc
cagaaggatatagacaacagcaacgtggagatggagaggatgaagttggagcagcagaag
ctacaggccatcgtcaagtccttggaaaaggacatcctggctctgaagaaagcgatccag
gagagggacgagaccatccaagacaaggagaaacgcatctatgatctgaagaagaagaac
caggagctggagaagtttaaatttgtcctggactacaagatcaaagagctgaagaaacaa
atagagcccagagagaatgatatcaaggagatgaaggagcagatccacgagatggaggag
gagctggataccttccacaagaagaacactcagggagagctggacatcgctgagctgaag
ctcaaactcaccaccactgacaaggaaatgcacaagggcctgcagaaggtgagagatgtg
gaggccctggtacgcaggttcaagacggacctccataactgtgtggggttcatccaagag
cccaagaggctgaaggagagcatcagagacctgtacgaccgctacacacagcagagtgac
gtgctggataaagttagtgtggacccaaacgtccagagggagtacgctaggcaaagggac
cacctggagaggaacgtggcgtccctgaagaggaagctggcccaagacagcgtggtccac
catgctgacaacgtcaagatcatgcaggagaacgtgactctgatcagtgaggtcaacgac
ctgcggcggcagctgcatctggcgcgctcccaggtctatgactacaagagtctgatggga
aagaagggcctgaagcagaccaacacactcaaagccctgctgtctcccagggccaacccc
agtaacatggtggtccgtctgaatgaggaggacgaaggggaccgcatcatccagctgcag
cgcctagagatccagagactgagagaggagatacaggtcctgatgaagatacacccctac
agacccccctccaccgccaagctaccctccctccaaaccaacacataa
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