Oncorhynchus tshawytscha (Chinook salmon): 112250808
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Entry
112250808 CDS
T05605
Name
(RefSeq) excitatory amino acid transporter 1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112250808
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112250808
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
112250808
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
112250808
NCBI-ProteinID:
XP_042177993
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Position
LG05:51421826..51435461
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AA seq
597 aa
AA seq
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MLSVLSRIWTVRRESLNSTMSVSHETCLLDQVLELIMNEKPPNTASLFLNEDADKPPLPN
RGLWRRLRRAMQKRAASTQDRMSTITKKSIKGFLKRNLFVLLTIAAVALGVMLGFALRPH
NLTLREIKYFAFPGELLMRMLQMLVLPLIVSSLVTGISSLDSKASGKMGMRAVAYYMVTT
LIAVFIGIVIVIVIKPGKGHRDSPVASSGTIEPVHAADAFLDLIRNMFPPNLVEACFKQY
KTVYKKTIHTKNVTVALSLTDSLNATEAALAVNMSRVLQTIQETVVEMIPVSGSSNGVNA
LGLVVFSMCFGLVIGSMKQQGQALRDFFDCLNEAIMRLVAIVIWYAPVGILFLIAAKIVE
MKNLAEVGGQLGMYTVSVIVGLLIHGLFVLPLLYFLVTRKNPYTFMAGLLQALITALGTS
SSSATLPITFRCLEENNRVDKRVTRFILPVGATINMDGTALYEAVAAIFIAQVNDMELNF
GQILTISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTN
VLGDSIGAGIVEHLSRQELQSQDVEVGNSVIEENEKPYQLICQKNDSVKHRNSETPM
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctatctgttttatctaggatttggactgttcgaagagaatccctaaactcaaccatg
agtgtttcccacgaaacctgcctcctggaccaggtgctggagctgattatgaatgagaag
ccccccaacactgccagccttttcctgaacgaggacgccgacaagccccccctccccaat
cgaggcctctggcggcggctacgtagagccatgcagaagagagcggccagcacccaggac
aggatgagcaccatcactaagaagagcatcaagggcttcctgaaacgcaacctctttgtc
ctcctcaccatcgcagcagtggctctgggtgtcatgctgggtttcgccctgcggccccac
aacctgaccctcagggagatcaagtactttgccttccctggagagctgctgatgaggatg
ctgcagatgctggttctgcctctcatcgtctccagcctggtcacaggtatttcctctctg
gacagcaaagcgtctgggaagatgggaatgcgggctgtggcttattacatggtgaccacc
ctcatcgctgtcttcattggcatcgtcattgtgattgtcatcaaaccagggaaaggccat
agggacagcccagtggcctctagcggtaccatagagccggtacacgcagctgacgccttc
ctggatctcatcaggaacatgttccctcctaatttggtggaagcctgtttcaagcagtac
aaaacggtctacaagaagaccatccacacgaagaacgtgactgttgccctcagtctgact
gactccctcaatgctacagaggctgccttggctgttaacatgagcagagtgctgcagacc
atccaggaaacagtggtggagatgatccccgtgtctggttcctctaacggggtgaacgcc
ctgggtctggtggtgttctccatgtgcttcggcctggtcattggcagcatgaagcagcag
ggacaggctctcagggacttcttcgactgcctcaacgaagccatcatgcgcctggtggct
atcgtcatctggtatgctccagtgggcatcctgttcctcatagcagctaagatcgtggag
atgaagaatctggccgaggtgggaggtcagctggggatgtacacggtgtctgtcatcgtg
ggtctgctcatccacggcttgtttgtcctgcccctgctctacttcctggtcaccaggaag
aacccctacactttcatggctggccttctgcaggccctcatcacagcactgggaacatcc
tctagctctgccaccctgcccatcaccttccgctgtctggaggagaacaaccgtgtggac
aagagagtgacacgcttcatccttcccgtgggtgccaccatcaacatggatggaactgcc
ctctacgaagccgtggcagccatcttcatcgcccaagtcaacgacatggaactcaacttt
ggccagatcctcaccatcagtatcacagcaacagctgccagcatcggcgcagcaggcatc
ccacaggctggtctggttaccatggtaatcgtattgacatcggtgggactacccacagag
gacataacgctgatcatcgctgtggattggttcctggatcgcttaaggactaccaccaac
gtgctgggggactctatcggggcaggcatcgtggagcacctgtctcgccaggagttgcag
agccaggatgttgaggtgggcaactcagtgattgaagagaatgagaagccctaccagctc
atctgccagaaaaacgactcagtgaagcatcgcaacagtgagacccccatgtag
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