Oncorhynchus tshawytscha (Chinook salmon): 112250832
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Entry
112250832 CDS
T05605
Name
(RefSeq) myocyte-specific enhancer factor 2B isoform X2
KO
K09261
MADS-box transcription enhancer factor 2B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112250832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112250832
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
112250832
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
112250832
NCBI-ProteinID:
XP_024277076
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Position
LG05:52586885..52605321
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AA seq
426 aa
AA seq
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MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNRLFQYAST
DMDKVLLKYTEYSEPHESRTNTDILETLRRKGLGLDGTELLDTEEPMQVAAEKYGPHSEG
MDLSLARQRYYAPSLHSPEAQFLVSTGCENGYPNSSNPSPSSHRPPAFKPLGPRPGSASP
AGPHCHAAFMSPHSGTGNSMFSHGNLTRALEMKTPPPLNLGSENRRTESHPGMGGTRANF
SSSRGLLYPGMHPGNHMLAMGKTGLLTHGLGGYSLSSAGPSDYSHPGFSHAVSLHRGTVN
PWQTAQPQEQHVPHLSPAMSSGGCSFPSQSSTPTPPPHPSLNLSIKSERCSPEHICSPTS
PPVRHLRQHSPMSTSNSAHHTPQEPYPANEREDFPKGGVPYPAQHGAEEKGGLPLRQLEI
SDGWQR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaaaaatacaaatctctcgtatcctagaccagcggaatcgacaggtgaca
ttcaccaagcgtaagtttggcctgatgaagaaagcgtatgagctgagtgtactgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaaccgtctgttccagtacgccagcact
gacatggacaaggtcctgctcaagtacacagagtacagcgagcctcacgagagcaggacc
aacacagacatactggagactctgcggaggaaaggcctgggcctggacgggacagagctg
ctggacacggaggaacccatgcaggtggcagcagagaagtatggcccacacagtgagggc
atggacctctccctggcccgccagcgttactacgccccctccttgcactcaccagaggcc
cagttcctggtgtctactggctgtgagaatggataccccaactcctccaaccccagcccg
agctcccacagacccccggccttcaagcccctgggccccagaccaggctcagccagccct
gcagggccccactgccatgctgccttcatgtccccacactcaggtactggcaactctatg
ttctcccacggcaacctgacccgggccttggagatgaagactcctccccctttgaatctg
ggcagtgagaaccggcggacagagagccacccaggcatgggtggcacacgcgccaacttt
agcagttctagaggcctactgtacccgggcatgcacccagggaaccacatgctggcaatg
gggaagacaggtctgctgactcatggtctggggggctacagcctctcctctgctggacca
tctgactacagtcacccaggtttctcccatgccgtgagtctacatcgtgggactgtgaac
ccatggcagacagcacaaccacaggagcagcatgtacctcacctcagcccagcgatgtcc
agtggagggtgctcttttccttctcagtcctcaacccccacccctcctcctcacccctcc
ctcaacctcagcatcaaatcggagcgctgctccccggagcacatctgctccccgacctct
ccgcccgtgcgccacttgaggcagcactctccaatgagcacctccaattccgctcaccac
accccccaggagccctacccagccaatgagagagaggatttccccaaaggaggtgttccc
tacccggctcagcacggggcagaggagaaaggagggctgcccctgaggcaattagaaatc
agcgatgggtggcaaagatag
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