Oncorhynchus tshawytscha (Chinook salmon): 112250854
Help
Entry
112250854 CDS
T05605
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112250854
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
112250854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
112250854
NCBI-ProteinID:
XP_024277108
UniProt:
A0A8C8M1V9
LinkDB
All DBs
Position
LG05:53325778..53401518
Genome browser
AA seq
1073 aa
AA seq
DB search
MDEAEDGEDESKFQQPLLCGTGSVGGGGDRNGLSLKMKQFTPGGGASSTARKNSNNELWF
MQGEESAPCAPTGATSCALLCQGDATARGGSYYRAGGDLAPGSAVTGLATCWTGEGTTGV
ICNNNGDCRRDPNISGSLSSIVSRQEKQTGGIVAADNGKRPTRCNSRVASMDGSITSVQG
QGPEVAGATTTGNEKKDSRVSFSSAPNRKASSSVQNQQNRNSLAFFKSEDGPQIVPDDGE
PQDNRTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQERVQSAGNWIIHPYSDFRFYWD
FTMLMFMVGNLIIIPVGITFFKDETTAPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEI
ILDPRKIKRTYLKTWFLVDFVSSIPVDYIFLIVEKGIDSELYKTARALRILRFTKILSLL
RLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFP
QDCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCY
AMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDE
ESILEELNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREG
TIGKKMYFIQHGVTSVLTKGTMGMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSV
DNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEIIQEIV
KYDREMVQQVDMQRPRAMSMSNPPTHGGIFAPPAPPQSSAIATLQQAVAMSFCPPMAGPL
VGAGALQSPRMVRRFQVMQSMSASPPPQTEQTMQPQLHAGGAFASALSSPPIQSPLAAGG
RTFQYGHSSGSQLSLVQQIVPSPPHRPNTHNSTRSLHIGSLSQDARALSASQPSLPQGGA
QPVAPSPSQSNRVSSTSIGPPQTPPGSVGLRSAVTHRMVLPHQMSVGAFPLASLPGTLTS
LGTGMGAGMGIGMGVGMGSVLAPALPDSGLPKKDSKASHPETDHVRSRLSSNL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggctgaggatggagaagatgagtccaaattccagcagcctttattgtgcgga
accggctccgttggtggcggaggcgataggaacggtctaagtttgaagatgaagcaattt
acgccaggagggggagcatcatcaacagcgcgcaagaactccaacaatgagctgtggttc
atgcaaggcgaagagtccgcaccttgtgctcctacaggcgccacaagctgtgctctgtta
tgccagggagatgctactgcccgtggcggctcatactatagggctggaggggacttagcc
ccagggtcagcggtaactgggttggctacttgttggacaggtgaaggcactaccggtgtg
atatgcaacaacaacggagattgcagaagggaccccaacatttcagggagcctgtcctcc
atcgtctctaggcaggagaaacagaccggtggaatagttgcagcggacaacgggaaaagg
ccaactagatgtaattccagagtcgccagcatggacggttcgatcacctcagtacagggg
caagggcccgaggtggccggggccacaactactggcaatgagaaaaaggactccagagtt
tccttctcaagtgcccctaatagaaaagcatcgtcctctgtgcagaaccaacagaacagg
aattctctcgcattttttaaatctgaggatggaccccagattgtgccagatgatggggaa
ccgcaggacaatcggacttatatgcagcgccaatttagttccatgcttcagcctggagtt
aataaattttccctgcgtatgtttgggagccaaaaagcggtggaaaaggaacaggagcgc
gtccaatcggccggtaattggattattcatccatacagcgatttcaggttctactgggat
ttcaccatgctgatgttcatggtgggcaacctcatcatcatccccgttgggatcaccttc
ttcaaggacgagaccaccgcgccctggatcatcttcaacgtggtctctgacaccttcttc
ctcatggacctggtcctcaacttccgcacaggcattgtatttgaggacaacaccgagatc
atcctggaccccaggaagatcaagaggacgtacctgaagacctggttcttggtggacttt
gtctcctccatccctgtggattatatcttcctgatcgttgagaaggggatcgactctgag
ttgtataagacggccagagccctgaggatcctacgctttaccaagatcctcagtctgctg
aggctgctcaggctgtccaggctaatccgctacatccaccaatgggaagagatcttccat
atgacctatgacctggccagtgcagtgatgcgtatcttcaacctgatcggtatgatgctg
ctgctgtgtcactgggatggctgtttgcagttcctggttcccatgctgcaggacttcccc
caggactgttgggtctctctcaacaagatggtgaacgactcgtggagcgagctgtactcc
tttgccctgttcaaggccatgagtcacatgctgtgtatcggttacgggcgccaagcccca
gagagcatgtctgatatctggctgaccatgctcagtatgatcgtgggcgccacctgctat
gccatgttcattggccatgccaccgccctcatccagtccctggactcatcccggcgccag
taccaggagaagtacaaacaagtggagcagtacatgtctttccacaaactgccagctgac
ttccgacagaaaatccatgactactatgaacacagataccagggcaagatgtttgatgag
gagagcattctggaggagcttaatgaaccactgcgggaggaaattgtcaacttcaactgc
cgtaagctggtggcatccatgcccctgtttgccaatgccgaccccaactttgtgacagcc
atgttgaccaagctccgcttcgaggtcttccagcccggagattacatcatcagggagggc
accatcggcaagaagatgtacttcatccaacatggtgtgaccagcgtgttgaccaaagga
actatgggcatgaagctttctgatggatcctactttggagagatctgtctgttgacccga
ggcagacggacggccagtgtgcgggcggacacgtactgccgtctctactccctgtctgtg
gataacttcaatgaggtgctggaggagtaccccatgatgagacgagccttcgagactgtg
gccatcgaccgactggaccggatagggaagaagaactcaatcctaatgcacaaggttcag
catgacctcaactcaggtgtcttcaacaaccgagagaatgaaattatccaagagattgtg
aaatatgaccgtgagatggtgcagcaggtggacatgcagaggcctcgtgccatgtccatg
tccaacccccccacgcatgggggtatcttcgctcctccagccccacctcagagctcagcc
atcgccaccctccagcaggctgtggctatgagcttctgtccccccatggcaggccccctg
gtaggggccggggccctgcagtcacctcggatggtacggaggttccaggtgatgcagagc
atgtcagcctcccctcctccccagactgagcagaccatgcagccccagctacacgccggt
ggtgccttcgcctccgccctctcgagcccccccatccagagccccctagctgctggggga
cggacattccagtacggccactcttctggctcccagctctccctggtccagcagatcgta
cccagccccccacaccggcccaacactcataacagcacccgctctctgcacattggcagt
ctgagtcaggacgccagggcactgtctgcctctcagccctctctgccccagggaggggct
caacccgtggccccgagcccatcacagtccaaccgtgtttcctcaacctccattgggcca
cctcagacccccccgggctctgtggggctcaggagcgctgtgactcataggatggtgctg
ccccaccagatgtctgtgggggcgtttcctctagcctccctcccggggactctgacatcg
ctggggacaggcatgggtgcgggtatgggaatcggcatgggagtgggcatgggatcagtc
ttggcgccagcccttccggactcgggtttacccaaaaaggactccaaagccagccaccct
gagacagaccatgtcagatcgaggctatcttccaatttgtga
DBGET
integrated database retrieval system
