Oncorhynchus tshawytscha (Chinook salmon): 112250861
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Entry
112250861 CDS
T05605
Name
(RefSeq) protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
KO
K09666
beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112250861
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112250861
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112250861
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Gene cluster
GFIT
Motif
Pfam:
GNT-I
ILEI
Motif
Other DBs
NCBI-GeneID:
112250861
NCBI-ProteinID:
XP_024277123
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Position
LG01:41575905..41605535
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AA seq
653 aa
AA seq
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MDTWTPNPRAKPFIPRQQRSLYLTWKYKLTNKRALRRGCQAGAVLFLLVTVIVNIKLILD
TRRVANEEEAVQEYDDALPNMETPRKTASGRKVLDIEVYSSRSKVYVAVDGTTVLEDEMR
EQGRGIHVIVLNQATGHVMAKRIFDTYSPHEDEAMILFLNMVTRGRVLIFTIKDEGTFHL
KESAKNLLKGLGSQAGLNLSWRDMWTLVVKKGGQLYGEKHSKSPALSTWGDPVLLKTEVQ
LTASEDAECHWADTELNRRRKLFCSKVEGYGSICSCKDPAPIEFNPDPLPNNNVFNVPVA
VIAGNRPNYLYRMLRSLLSAQGVNPQMVTVFIDGYYEEPMDVVELFGLKGVQHTPISIKN
ARVSQHYKASLTATFNLHPDADFAIVLEEDLDISIDFFSFLSQTVHLLNEDDSLYCISAW
NDQGYEHTAEDPALLYRVESMPGLGWVLKKSLYKDELEPKWPTPEKLWDWDMWMRMPEQR
KGRECIIPDVSRSYHFGIIGLNMNGYFHEVYFKKHRLNTVPNVQLKNVDGLKKDAYELEI
QNLLKEADVLDHSKNPCEDLFIPDTEGKTYVMYIKMELETDTSTWTELAKCLHVWDLDVR
GYHNGMWRLFRKRNHVLVVAVPISPYSVKKPVNVTPIHLEPPPKEEGAPMEQR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacacctggacaccgaatcctcgagcaaaaccgttcatccctcgccagcaacggagc
ctctatctcacctggaagtacaaattaactaacaagcgagctctccgccgaggctgccag
gctggagcggttctatttctgctggtcacagtcattgtaaatatcaaattaatcttagac
acaagaagagtagccaatgaggaagaggcagtgcaggagtatgacgacgccctgcccaac
atggagaccccgcggaagacggcgagcggtaggaaggtcctggacattgaggtgtactcc
agccgctccaaagtctatgtggcagtggacggcaccactgtgttggaggatgaaatgcgg
gagcagggccgaggcattcacgtgatagtcctcaaccaggctacaggccatgtgatggcc
aagaggatatttgacacctactctccccatgaggacgaggccatgatcctcttcctcaac
atggtgacgcgtggcagggtcctcattttcaccatcaaggatgaggggacgttccacctg
aaagagtctgctaaaaacctgctgaaggggcttgggagccaggcgggcctcaacctcagc
tggagagacatgtggaccttggttgtgaagaaaggaggtcagttgtatggtgagaaacac
tccaagtccccagccctgtccacctggggagatcctgttctgctgaagactgaggtgcag
ctcactgcttctgaagatgcagagtgccattgggctgacacagagctgaacaggaggagg
aaactcttctgcagtaaggtggagggctacggcagcatctgtagctgcaaggacccggcc
cccattgagttcaacccagacccactccccaacaacaatgtgttcaatgttcctgtggcg
gtcatcgctgggaacagacctaactatctgtacaggatgctgaggtctctgctctcggcc
cagggggtcaacccacagatggtcacagtcttcatcgatggatactatgaggagcccatg
gatgtggtggagctgtttggactgaagggggttcaacacactcccatcagcatcaagaat
gccagagtatcacagcactacaaagccagtctcactgcaaccttcaacctacacccagat
gccgactttgccatagtcctggaggaagacctagatatctccatagatttcttcagtttc
ctgagccagaccgtccatctgctcaacgaggacgacagcttatactgcatctcggcctgg
aacgaccagggttatgagcacaccgcagaggacccagctctcctctacagagtggagagt
atgccaggcctgggctgggtgctgaagaagagtctctacaaagacgaactggagcccaag
tggcccacgcctgagaagctgtgggactgggacatgtggatgcgtatgccagaacagagg
aaaggcagagagtgtatcatccctgacgtgtcccgctcctaccactttggcatcatcgga
ctcaacatgaacggctacttccacgaagtgtatttcaagaagcacaggctcaacacggta
cctaatgtccagctgaagaatgttgacggcttgaagaaagatgcctacgagctggagatt
cagaacttacttaaggaggctgatgtactggaccacagtaagaacccatgtgaggacttg
ttcatccctgatacagaggggaagacctatgtcatgtacatcaagatggagctggagact
gacacatccacctggactgagcttgccaagtgtctccatgtgtgggatctggatgtgaga
gggtaccacaacggcatgtggaggctcttcaggaagaggaaccatgtcctggttgtggcc
gttcctatctcgccatattctgtgaagaagccagtgaacgttacacccatccacctagag
cctccgcccaaagaagagggagcccccatggagcagcgttag
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