Oncorhynchus tshawytscha (Chinook salmon): 112250873
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Entry
112250873 CDS
T05605
Symbol
mbd3b
Name
(RefSeq) methyl-CpG-binding domain protein 3b isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112250873 (mbd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112250873 (mbd3b)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
112250873 (mbd3b)
Chromatin remodeling factors
NuRD complex
112250873 (mbd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
Pardaxin
Clr2_transil
Motif
Other DBs
NCBI-GeneID:
112250873
NCBI-ProteinID:
XP_024277147
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All DBs
Position
LG05:complement(54240956..54247934)
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AA seq
271 aa
AA seq
DB search
MEKKRWACLALPKGWQIEEVTRKSGLSAGKRDVYYFSPTGKKFRSKPQLARYLGNQMDLS
SFDFRTGKMLMSKLNKNRQRLRYDNNNQTKGKPDLNTSLPVRQTASIFKQPVTKVTNHPS
NKVKTDPQKAVDQPRQLFWEKKLGGLDAFDIAEELVKTMDLPKGLQGVGPGCTDKTLLSA
IASALHTSAAPITGQLSAAVEKNPGVWLNTSQPLCKAFIVTDEDIRKQEELVYSVRKKLE
EALMADMLAHVEEAASEGDSLEEDNDDMETV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaaggtgggcatgcttggctctccccaagggctggcagatcgaagaagtg
accagaaagtcgggtttgtctgcgggaaaaagagatgtctattattttagtccaaccggg
aagaagtttcggagcaagcctcagctggctcgttaccttggcaaccagatggacctcagc
tccttcgacttccgcacagggaagatgctcatgagtaaactgaacaagaacaggcagaga
ctgcgctatgacaacaacaatcagaccaagggcaagccagacctgaacacatcactcccc
gtcagacagactgcttccatctttaagcaacctgtcaccaaggttaccaaccaccccagc
aacaaagtcaagacagatccacagaaagccgtcgaccagccgagacagcttttctgggag
aagaagcttggtggtctcgatgcctttgacatcgcagaggagctagtgaagacaatggac
ctgcctaaaggtcttcaaggagttggacctggatgtacagacaagactctactgtcagcg
atagccagcgccctgcacactagtgcagcccccatcaccggtcagctgtctgcagctgtg
gagaagaacccaggggtgtggctcaacacatcgcagcccctgtgcaaggccttcattgtc
actgacgaggacatcaggaagcaggaggagctggtgtacagtgtgaggaagaagctggag
gaggctctaatggcggacatgttggctcatgtggaggaagcagccagcgagggcgactca
ctcgaggaggacaacgacgacatggagactgtatag
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integrated database retrieval system
