Oncorhynchus tshawytscha (Chinook salmon): 112250890
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Entry
112250890 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: transducin-like enhancer protein 1
KO
K04497
groucho
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112250890
04330 Notch signaling pathway
112250890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112250890
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
112250890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
112250890
NCBI-ProteinID:
XP_042178033
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Position
LG05:55319304..55363969
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AA seq
786 aa
AA seq
DB search
MFPQNRPPAPLQPPPGSSASAAAASGTPQALKLTYPETLDRIKEEFQFLQTQYHSLKMEC
EKLATEKTEIQRHYVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEHQQQVVQA
MERAKQQQLQAQHLSQHVAQGLQGLQSLQMGPHPGGLPHPGLALGGGSGLLALSGALGAQ
LAAKEGHERAHMEAAAAAAAAEHHRGWLRGRGAMLSIMDVDREAGPSSMSNGDKGRSADY
LGNGKKRKADEKEFMTDYGSDADKSDDNLVVDEDPSSPRSVHSYSSRENGLDKLPXSRKD
ALPQASPASLASSSSQASPSRSKDREPPREKSSTPGMKPGTPHSSQDSSTPGPSAPPQFR
PLPGKPGVDPLALGLRNPLAVQGAYPPGAFGLPPPGVNGELAGAAAAYGAGLHLVSPQMN
GSAAAAGYGRSAVVGYESPHPHMRVPGLPASLQSAASGKPAYSFHVSADGQMQPVPFPPD
ALLGPGIPRHARQIHTLNHGEVVCAVTISTSTRHVYTGGKGCVKVWDISQPGSKSAMAQL
DCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISP
DNKVCFSCCSDGNIVVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWD
LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVSKPDKYQLHLHESCVLSL
KFAYCGKWFVSTGKDNLLNAWRTPYGSSIFQSKESSSVLSCDISPDDQFIVTGSGDKKAT
VYEVIY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcaaaatcgacccccggcacctctccagccaccccctgggtcctcggcgtcg
gcagctgcagcttcgggaaccccccaggccctgaagctcacatacccagagaccctggac
cgcatcaaggaggagttccagttcctccagacccagtaccacagcctgaagatggagtgt
gagaaactggccacagagaagactgagatccagagacactacgtcatgtattacgagatg
tcctacggccttaatattgaaatgcacaaacagacggagatcgccaagcggctgaacgtg
atctgtgcccagctcatccctttcctgtcacaggagcaccaacaacaggtggtccaggcc
atggagcgcgccaagcagcaacagctgcaggcgcagcacctctctcagcacgtggcccag
ggcttgcagggcctgcagagcctgcaaatggggccccaccctgggggcctccctcaccct
ggcctggcgctgggcggtgggtctggcctactggccctgtccggggccctgggggcccag
ctggctgccaaagagggccatgagagggcccacatggaggctgctgctgctgctgccgcc
gcagagcaccacagaggctggctgcggggacgcggggcgatgctgtccatcatggacgta
gaccgcgaggctggaccgagctctatgtccaacggggataagggccgttcagcagactac
ctcggcaatgggaagaagaggaaagctgacgagaaggagttcatgacagattatggcagc
gatgcggataagagtgatgataatttggtggtggatgaggacccctcatccccccgcagt
gtgcactcctactcgtccagagaaaacggcctggacaaactgcccncctcccgtaaagac
gcccttccccaggccagccctgcctccctggcctcctccagcagccaagcctcgccctcc
cgcagcaaggaccgggagccgccgagggagaagtccagtaccccaggtatgaagccaggc
accccccacagttcccaggactcctccacccctggccccagtgcccccccacagttccgc
cccctccctggaaaacctggcgttgaccctctggctctaggtctgaggaaccctctggcg
gtgcagggggcgtacccccccggggcgtttggcctgccccctccaggggtgaatggggaa
ctggcgggggcagcagcagcctacggggctgggctccacctggtctccccccagatgaat
ggctctgcagcagcagctggatatggacgatcagcagtggtgggttatgagtctcctcac
ccccacatgagggtcccagggttacccgccagccttcagtctgctgcctcaggaaaacct
gcttactctttccacgtcagtgcggatggacagatgcagccagttcctttccctccggat
gctctgctgggcccgggcatcccacgacatgcccgtcagatccacactctgaaccacgga
gaggtggtgtgtgccgtcaccatcagcacctccacacgccacgtctacaccggcggcaag
ggctgtgtcaaggtgtgggacatcagccagcctggcagcaagagtgccatggcccagctc
gactgtctgaatagggataactacatccgttcctgcaagctcctccctgatgggcggacc
ctcattgttggaggcgaggccagcacgttgtcaatctgggacttggccacacctactccc
cgcatcaaggcggagttgacgtcttctgctccggcctgctatgctctggccatctcccct
gacaacaaggtctgcttctcctgctgcagcgacggaaacattgtagtctgggacctgcac
aaccagaccctggtcaggcagttccagggtcacactgatggggccagctgtattgacatc
tccaacgatgggaccaaactgtggacgggggggctggacaacacagtacgctgctgggac
ctgagagagggacgacagctgcagcagcacgacttcacctcacagatcttctctctgggc
tactgtcctacaggagagtggctggcagtgggcatggagagcagtaatgtagaagtgctg
cacgtctccaaaccagacaagtatcagctgcacctccacgagagctgtgtgctctcactc
aagttcgcctactgtggtaaatggtttgtgagcacaggcaaagataacctcctgaacgca
tggcggacaccctatggatcaagcatattccagtcaaaggagtcgtcttcggtgctcagc
tgtgacatctcccccgatgaccagttcattgtgacgggctccggtgacaagaaggccact
gtgtacgaagttatctactga
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