Oncorhynchus tshawytscha (Chinook salmon): 112250897
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Entry
112250897 CDS
T05605
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112250897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250897
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
AP-3 complex
112250897
Endosome - Golgi transport
112250897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
PDS5
RTP1_C1
RasGEF_N_2
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
112250897
NCBI-ProteinID:
XP_024277191
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All DBs
Position
LG05:complement(55786904..55818819)
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AA seq
1256 aa
AA seq
DB search
MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGNTQRNGICE
VLYAAAWICGEFSEHLEEPMATLEAMLRPKVATLPGHIQAVYVQNAAKLFATVLRGQEGV
PADSTVAQETSQLLIDRLPLFVQSSNLEVQERASCILQLVKYIQKLQQKDVEVAEEVTAL
FAGELNPVAPKAQKKVPVPEGLDLDVWINEPPSGSESEDEGRKSKGKAVFAKEESRHTKP
RYTEVDEKELAKRREVRKAEQANNPFYIKASPSSQKVYQDGVGVEHIPVVQIDLSVPLKV
PGMPMSDQYVKLEEERRERNKADKKKKKDKKKREKGEKGHRRRGDSGPESEEDITPAHMV
DIVTEEMPENALPSDDDDKDPNDPHKALNIDLDNLLAASRRPLADSEKKLPVRSHRPDEV
LKSPMEDRQVVEVVPEPKKKTGKEKKEKKDRKKSKEKKKKHKQEEEEDLMGAGSEEPVQP
EETKEVAAPPPASTPEASDLDFWLSNAPVPSNPQAAAAPASTPRTASGMAAVAPDSEPEE
AKDTEPEETKSSTHKKKKQKKEKKKKKHHHNHSDGAGDESVQNGTVEEEEPLPPMSNYAL
LAENSYIKMMKQDADKVCDIQGNLQDGSQVVVSVIFENKCDSFIKSMEFNVLDSLNSKLQ
RPDGAGPHDGLIVPFQLPPGISNEARFIFSVQNIMMPQKLKGTLTFIVKTDDSSTHEKLD
FKLHFTCTSYLITTPCYSDAYSKLLESGDLKGCSLKLEGVNQPFHHLLARICFHHHFSVV
ERIDSCASMYSRSIQGHHMCLLVKTADQTVSIDAKCDEPGLLGNVLDEIKLTFSQC
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagattgttaaagggagcatcgatcggatgttcgataaaaaccttcaagat
ttagtacgtggaattaggaatcacaaggaagatgaggctaagtacatctccacctgcatt
gatgagatcaagcaggagctcaagcaggacaacattgctgtcaaggccaatgctgtgtgc
aaactcacctacttacagatgctgggctatgatgtcagctgggctgcattcaacatcgtg
gaagtcatgagttcctcaaaattcacatacaagagaattggttacctggctgcctcccag
tgctttcatgagagcactgatgtcatcatgctgacaaccaatcagatccgaaaggatctg
agcagtcctaaccagtacgacactggcgtggctctcactggcctctcctgcttcgtgacc
cctgacctggctcgggacctggccaatgacatcatgactcttatgtcccacacaaagccg
tacatcaggaagaaggccgtacttatcatgtacaaggtgttcctgaagtacccagagtct
ctgcgccctgctttccccaggctgaaggagaaactggaagaccctgaccctggggtccag
tcagcggctgttaatgtcatctgtgagctggccaggagaaaccccaagaactacctgtct
cttgccccgctcttcttcaagctcatgacctcctccaccaacaattgggtcctcatcaag
atcatcaagctgtttggtgccctcacacccctggagcctcgcttggggaagaagctgatt
gagcccctaacaaacctcatccacagtacctcggctatgtcacttctatatgaatgtgtc
aacactgtaatagcagtgttgatttccctgtcctccgggatgccaaatcacagtgctagt
attcagctctgtgtccagaaactgcgaatcctgattgaagactcggaccagaacttgaag
tacctgggcctgctggccatgtccaagatactgaagactcatcccaagtctgtccagtcc
cacaaggacctcatcttgcagtgtctggatgacaaggacgagtccatccgcctgagggct
ctagacctgctctacggcatggtgtccaagaagaacttgatggagatagtgaagaagctg
atgttgcacgtcgacaaggctgagggaaccacttaccgagatgagctgctcaccaagatc
atcgacatctgcagccagagcaattaccagtacatcaccaactttgaatggtacatcagt
atcctggtggagctgacccgtctggagggcacgcggcatggccacctcattgcctcccag
atgctggacgtggccattcgggtcaaggccatccgagcctttgctgtggcccagatggct
actctactggacaacgcccacctgcttaccggcaacacacagcgcaacggcatctgtgag
gttctctatgccgccgcctggatctgtggagagttctcagaacacctggaggaacccatg
gcaacactggaggccatgctgcggcccaaggtggccaccctgccgggccacatccaggcc
gtgtacgtgcagaacgctgccaagctgtttgccacggtgttgcgcggccaggagggggtg
ccagcggacagcacggtagcccaggagaccagccagctgctcattgacaggctgcctctt
tttgtccagagttccaacctggaggtgcaggagagggcctcctgcatcctgcagctggtg
aagtacatccagaagctgcagcagaaggacgtagaggtggctgaggaggtgactgctctg
tttgctggggagctcaaccctgtggcccccaaggcacagaagaaagtacctgttcccgaa
ggtctggacctggatgtgtggatcaacgagcctccgtctgggagtgagtctgaagacgag
ggcaggaagtccaagggcaaggctgtgtttgccaaggaggagtccagacacaccaagcca
cgctacactgaggtggacgagaaggaactggccaagaggagagaagtaaggaaggcagag
caggccaacaacccattctacatcaaggcctccccctcctctcagaaggtgtaccaggat
ggtgttggtgtggagcacattccagtggtgcagattgacctcagtgtgcctcttaaggtc
ccagggatgccaatgtcagatcagtatgtgaagctggaagaggagcgtcgggagagaaac
aaggcagacaagaagaagaagaaggacaagaagaagagggagaagggcgagaagggccac
cggagaaggggggactctggcccagagagcgaggaggacatcacccccgcacacatggtg
gacatcgtcactgaggagatgccagagaatgccttacccagtgatgacgacgacaaagat
cccaacgacccccacaaagctctgaacatcgacctggacaatttgctggcagcatctcgc
aggcccctggcagacagcgagaagaaactgccagtcaggtcacaccgtcccgacgaggtc
ctcaagagccccatggaagacaggcaggtggtggaggttgtaccagagcccaagaaaaag
acaggaaaggagaagaaggagaagaaggacaggaagaagagtaaagagaaaaagaaaaag
cacaaacaagaggaagaggaggatcttatgggcgctgggtcagaggagcctgtccaacca
gaagagaccaaggaggtggcagccccgcctcctgcctctacaccagaggcttcggatctg
gatttctggctctcaaatgctccagtgccctctaaccctcaggcagcagctgcccctgcc
tccacccctaggacggcatctggtatggctgccgtggcaccagactctgagcctgaagag
gccaaagacactgagccggaggagactaaatcctccacgcacaagaagaagaagcagaaa
aaggagaagaagaaaaagaagcaccaccataatcatagcgatggggccggagacgagtct
gtgcagaacggcactgtggaggaggaggagcctctgccgcccatgtccaattacgccctg
ctggctgagaactcctacatcaagatgatgaagcaggatgctgataaggtgtgtgacatc
caggggaatctgcaggacggtagccaggtagtggtctctgtcatctttgagaataagtgc
gacagctttatcaaatccatggagttcaacgtgctggactctctcaactccaagctgcag
cggcctgatggagctggcccacacgacggcctcatcgtgcccttccaactgccccccggg
atatcaaacgaggcacgcttcatcttctcagtgcagaacatcatgatgccccagaaactg
aagggaaccctcaccttcatagtcaagactgatgattcctccactcacgagaaactggac
tttaaactgcactttacctgcacctcctacctgatcactactccctgctacagtgatgcg
tattctaagctgttggagtcaggggacctgaaggggtgctctctgaagctggagggagtt
aatcagcccttccaccatctactggccagaatctgcttccaccaccacttctctgttgtg
gagaggatcgattcctgtgcctccatgtacagcaggtcaatccagggtcaccatatgtgt
ctgctggtcaaaactgctgatcagaccgtgtccatcgatgctaaatgtgatgagccgggg
ctgcttgggaatgtgctggatgagatcaaactcaccttttctcagtgctga
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