Oncorhynchus tshawytscha (Chinook salmon): 112250904
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Entry
112250904 CDS
T05605
Name
(RefSeq) transcription factor LBX1-like
KO
K09353
homeobox protein LBX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112250904
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112250904
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Remorin_C
Motif
Other DBs
NCBI-GeneID:
112250904
NCBI-ProteinID:
XP_024277254
UniProt:
A0AAZ3QJZ1
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Position
LG01:complement(56771917..56773732)
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AA seq
266 aa
AA seq
DB search
MTSKEPTVMEDRRRSALNQLPQPANSSKPLTPFSIEDILNKPSVKRSYSSCGTAHMLSCS
EKLSSSGHSLCSRAFFTQTSPLCALEELASKTFKGLEVSVLQAAEGRDGTTLFGSRNNPK
KRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRD
LEEMKADVESAKAVGTVSFEKMAKLAELEKCAANGALGPNRAESPSLLNHEHDTSNKLLL
SLPSSPYTDHASSKGCSDDEEIDVDD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaaagagcccacggttatggaggaccggagacgcagtgcgctgaaccagctc
ccgcagccggccaactccagcaagcccctgacgccgttcagtatagaggacatcctgaac
aagccctcggtgaagagaagttactccagctgcgggacggcgcacatgctctcctgcagc
gagaagctgtcctcttcgggtcacagtctgtgcagccgtgcctttttcacccaaacctcc
ccactctgcgctctggaggagctagccagcaaaaccttcaaaggcctcgaagtcagtgtt
cttcaagcggcagaggggcgagacggcacgacactattcggttcgcggaataaccccaaa
aagcgccggaagtctcgcacggccttcaccaaccaccagatctacgagttggagaagcga
ttcttgtaccagaagtatctgagtccagctgaccgtgaccagatagcacagcagctcggc
ctcaccaatgcacaggtcatcacctggttccaaaaccggcgcgctaaactcaaacgcgac
ctggaggagatgaaggcggacgtggagtcggccaaagccgtgggcacagtgtctttcgag
aaaatggccaaactagccgagctggagaaatgcgcagctaacggcgcgctgggccctaac
agagccgagtcaccttcgctattgaaccatgagcatgacacatctaacaaactattattg
tccttgccttcatcgccatatacagaccatgctagcagtaagggctgctccgacgatgag
gagattgacgtggatgactga
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