Oncorhynchus tshawytscha (Chinook salmon): 112250918
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Entry
112250918 CDS
T05605
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112250918
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112250918
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112250918
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112250918
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
O-linked Gal type
112250918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
112250918
NCBI-ProteinID:
XP_024277238
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Position
LG05:complement(56283056..56325325)
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AA seq
618 aa
AA seq
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MMPAVGAVGVGLLCALLVALMPGGMSDLVTLVQDSVRPESSLLMPKVMIAILARNAAHSL
PHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYT
DEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADGDNLLTNPKILNLLMAENLTL
VAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRGAS
RELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEKES
FTHTIAEAMIDHNIAPSEYLYNPEMPQDKMGFDEIFLINLKRRLDRRQRMLSTMASLGLQ
ATITDAVDGKALNSSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTWVQMAERGL
SKVLVLEDDVRFEPRFKRRMMTIIEEVEKAQLDWDLIYVGRKRMQVHQPEHSVEGVNNLV
EADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPRDLKA
FSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRLHQHARKTEQQGRIHTVAQN
SVTGDSPPPAARSTRDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcggttggagccgtgggagtcggactgctctgcgcgctgcttgttgccctc
atgccgggtggaatgtcggacttggtgactctggtgcaggactcggtccgacccgaatcg
tcactgctgatgccaaaagtcatgatcgccattctggctcgcaacgcagcgcacagcctg
ccgcactacctgggctgcatcgacaggctagactatccgaaggagcggatagctatctgg
gcagcgacagaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcag
gctcaggaccagtaccactatgtggagtggagacctatggaggagcccaagtcctatact
gatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtgatgaagctgagg
caggctgctcttaaggcagcacgggaacgctgggcagattacatactgtttgcagacggt
gataacctgctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctg
gtagctcccatgctagagtcacgctctctctactctaacttctggtgtggcatcacccca
cagggttactacaaacgtacccctgactaccagccaatcagggaatggaagcgtctgggt
tgcttcgctgtacccatggtgcactctaccttcctgctggacctgaggcgtggcgccagc
agggagctggccttctacccccctcaccctgattacagctgggccttcgatgacatcatg
gtgttctccttctctgccaggcaggcagatgtgcagatgtacgtgtgtaacagagagcac
tatggcttcctaccggttcctctgaaggcctcgcagaatgttgacgacgagaaggagagc
ttcacacacaccatcgctgaggccatgattgatcacaacatagcaccctcagagtacctg
tacaatcccgagatgccgcaggacaagatgggctttgatgagatattcctgattaatctg
aaacgtcgtctggacaggagacagaggatgttgagcaccatggcctctctgggtctgcag
gccaccatcactgacgcagtggacggcaaggctctgaactcttctcagctgcaggcattg
ggtatagagatgattccaggttatcaggacccgtactctggccgtgttctaaccagagga
gagataggctgcttcctcagccaccactccacctgggtacagatggcggagcgtggtctt
tccaaggtgctggtgctggaggatgacgtgcgctttgagcccaggtttaagagacgaatg
atgaccatcatagaggaagtagagaaggcccagctggactgggatctcatctatgttggg
cgtaagcgtatgcaggtgcaccaaccggagcattcggtggaaggggttaataacctggtg
gaggctgactactcttattggacgctgggctatgccctgtcagcgcagggtgccaggaag
ctgctggctgctcaggccttcagcaagatgctacctgtcgatgagttcctccctgtcatg
ttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgggacctgaaggcc
ttctctgtggagcccctcctcctgtaccccacccactacacgggcgaaccgggctatgtg
agtgacacggagacctccaccatctgggacgacgaggccaccgccaccgactgggaccgc
ctgcaccagcacgccaggaagacagagcagcaaggccgcatccacaccgtggctcagaac
agtgtgacgggagactcacctccgcctgccgcccgctccacacgtgatgaactctga
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