Oncorhynchus tshawytscha (Chinook salmon): 112251009
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Entry
112251009 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 1B isoform X1
KO
K20160
DENN domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251009
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112251009
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
Motif
Other DBs
NCBI-GeneID:
112251009
NCBI-ProteinID:
XP_024277383
LinkDB
All DBs
Position
LG01:43958215..44132279
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AA seq
888 aa
AA seq
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MDSRINEIPERTFDLVLQIACPTSENEDPAVLWSFPQDYTDQEFLQTIPKFCFPFDVERV
SQSQVGQNFTFVLTDIESKQRFGFCRLTSGCRVCICLLSYLPWFEIYYKFLNTLADYLTK
NQENELNDMLNSLYSLPVPKPFTPVNLSVTALLHIATGQVLRDAPSRQPHSYFIAPDING
LPTIPESRNLTEYFVAVDVNNMLHLYASMLHERRIIITSSKLSTLTACVHGSAAMLFPMN
WQHIYIPVLPPHLLDYCCAPMPYLVGVHLSLLERVRSRSLEDVVILNVDTNTLESPQDDL
QNLPSDVVHSLKSKLKKQSTSTGSGVARAFLRAQAALFGSYRDALRYKPGEPVTFCEESF
VAHRSSTMRNFLEMAVNLQLFKQFIDGRLAKLNAGRGFTDLFEEEISEGGFCGSNSRSYQ
QWVHTVKRGGVLINTAMTKAKSHAKRGIRRLKQRVTYEEEDDGPFCSGSPTSTKSLSPRR
LQKRRHHYYAKSSMGCPDFAIDDDELDTASKISSEDSGEMPSYTEDSDDSYSLELDTDSS
HTGQMNLLEEILDSLSTTSTEHGKLSAAKSLDFFRSMDDIDYKSPNKSNPHSESNLPQMC
TSGSRVGGVGGGGEQGGSWQDDSALHGKHLPPSPRRQPSKSSLKKPKQNPLTASPPATAA
VPAKDNKVPNLLPKIQALQTKTQPLHAKPAICLSKPHPEEPSLPTPPSPHLGDQNPSSSR
SPAPTRASTHNPPPATHTSTLTRVRASIDPQPESETKPQTTSSILRGNVLSKETVRQDQA
LRRQGSQDKERQGVKAGQLSVPVPWERGRPEEGGQGEDQGLGLGLGKEQGRVFGAEVQEK
GLLEEIESMCHLSSAFQTSLQLSQVQCHTNNTHNNTHANSHSKATDKS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagaataaacgagattccggaaaggacgtttgatttggtactacagattgca
tgcccaacatctgaaaatgaagatcctgccgtgctgtggagcttcccccaggactacaca
gaccaggagtttctccagacgatacccaagttctgcttccccttcgatgtggagagggtt
tcccagagtcaggtgggccagaactttacctttgtgctgacggacatcgagagcaagcag
aggtttggcttctgcagactcacttccggctgccgtgtctgcatctgtctgctcagttat
ctcccctggtttgagatctactacaagttcctgaacacactagcagattacctaaccaaa
aaccaggagaatgagctgaatgacatgctgaactcactgtacagcctgccggtgccaaag
cccttcaccccagtcaacctgagtgtgaccgcgctgttgcatatagccactgggcaagta
ctgagagatgcaccaagccggcagccgcactcctacttcatagccccagatatcaacggc
ttgcccacaatccccgagagtaggaacctgacagagtattttgtggcggtggacgtcaac
aatatgctgcatctgtacgccagcatgctgcacgaaagacgcatcatcattacctcaagc
aagcttagcactttaactgcgtgtgtccacggctctgctgccatgttgttccccatgaac
tggcaacacatttacatccctgtactgcctccacatctactggactactgctgtgccccc
atgccataccttgtgggagttcatctcagtctgctggagagagtgcgcagcaggtcattg
gaggatgtagtgattctgaatgtggacaccaacacactggagagcccccaggatgacctg
cagaacctgcccagcgacgtggtccactctctgaagagtaagctaaagaagcagtcgaca
tcaacaggaagcggagtagcaagggccttcctccgggctcaggctgctctgtttggatcc
taccgagatgccctccgatacaaacctggggaaccagtcacgttctgcgaggagagcttt
gtggctcaccgctccagcaccatgagaaacttcttggagatggcggtcaatctgcagctc
ttcaaacagtttattgacggccggctggccaagctgaatgcaggccgaggcttcactgac
ctgttcgaagaggagatcagtgagggaggcttctgtggaagtaattccagatcttatcaa
cagtgggtgcacaccgtcaagagaggcggcgtgctgatcaacactgcaatgactaaggcc
aagagtcatgccaagaggggcattcgcaggctcaagcaaagggtgacctatgaagaggag
gatgatgggccgttctgctcagggtctcccaccagcaccaagagtctgtcaccacggaga
ctgcagaagaggagacatcattattatgcaaagtcttccatgggatgtcctgactttgcc
atcgatgacgatgaactggacactgccagcaagatctcgtctgaggacagtggggagatg
ccgtcctacactgaggacagtgacgactcctattcgttggagctagacacagactcctcc
cacacaggccagatgaacctattagaggagatccttgactctctgagcaccaccagcaca
gagcatggaaaactcagcgctgccaagagcctggacttcttcagatctatggacgacatc
gactataagtctccgaacaagtccaacccccacagtgagagtaatctgccccagatgtgt
accagtggcagcagggtggggggagtaggtgggggaggggaacagggaggaagctggcag
gatgacagtgccctccacgggaagcacctgcccccctcccctcgtagacagcctagcaag
agcagcctcaagaagccaaagcaaaaccctttgacagcctctccaccggccacagctgca
gtcccagccaaggacaacaaggtccccaatctcctgcccaagatccaggcccttcagacc
aagacccagccccttcatgccaagcccgcaatctgtctctctaagccccatccagaggag
ccttcgctcccaacacctccatcaccacacctgggagaccaaaacccctcttccagccgc
tctcctgcaccaacacgtgcatccacacacaatcctccaccggcgacacacacctcaacg
ctgactcgtgttagagcctccatagacccccagcctgagtctgagaccaaaccccagacc
acatccagcatcctgcgggggaatgtgctgtccaaggagacggtgaggcaggaccaggcc
ctccggaggcagggcagtcaggacaaagagaggcagggtgtgaaggccgggcagctctct
gtgccggtcccctgggagagagggaggccagaggagggggggcagggagaggaccagggc
ctagggctggggttggggaaggaacagggcagggtctttggggcagaggtccaggagaaa
ggccttctagaggaaatagagtctatgtgtcatctcagctcagccttccagaccagccta
cagctgtcccaggtccagtgccacaccaacaacacacataataatacccacgccaacagc
cacagcaaagccaccgacaagtcctga
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