Oncorhynchus tshawytscha (Chinook salmon): 112251033
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Entry
112251033 CDS
T05605
Symbol
mcf2l2
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251033 (mcf2l2)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112251033 (mcf2l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CRAL_TRIO_2
PH
SH3_9
SH3_2
SH3_1
PH_10
GlutR_dimer
IQ_SEC7_PH
Spectrin
DUF6103
FliS
Motif
Other DBs
NCBI-GeneID:
112251033
NCBI-ProteinID:
XP_024277435
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All DBs
Position
LG05:60541841..60653120
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AA seq
1272 aa
AA seq
DB search
MHPHTHRNTHSKESALRGSPYHRVLRAGLSVWSRQEDLTMGSVMYEIMQQEIRPLLAVDI
IEQLHRQFALLSGGRGKDGAPIITFPEYSGFGDLLDEDFQNVVTYLTSIPSLDAASIGFV
IIIDRRRDKWSSVKASLTRIAGAFPGNLQLVLVLRPSRFFQRAVADIGMKLHRDDFKMKV
PIVMLNSLSDLHGYVDKGQLTCELGGNLEYCHSQWIHHRTAIENFAVTVKTTAQMLQKFG
TDLSETELPNDVQYTKDLLTTHTEKHDKLKDELKLAVQQGTTLLGCIKEQAAKSENHKLN
PDEMENQTTVERLLAQLDETENAFQQFWSKHYLKLEQCLQLRHFEHDFREVKVSLDSLMD
TLTFLSDIGDCVTRVEMLLNDLNTLEEKAQESLEKAQLHALHGDQLIQSNHYAVDSIRPK
CVELRRICDNFTNEAKKKYDILSKSNQIHKGIDKVNQWCESGVYLLASQAVDKCQSQDGA
EAALQDIEKFLETAKENQLSDLKNIHNQYELVLNAEVKANVKKALKRLDDVQEMFEKRQV
SLKKLSAKQTRPVQPVAPRPESSPNRPALSKTPRTTGPAPALSRRTSENSSATKQPMEAE
LAKKKNLSRKVKGSLKIEVMHEASQGGSSHILVTNETEESLSTRRRHIMNELIETERLYV
EELQSIMEGYAAELDNTELSHLIPTALENKKDVLFGNLPEIYEFHNRTFFKELENCMERP
ELVGTCFLKRKEELQIYEKYCQNKPRSEALWRQCGDGLFFQECQKKLDHKLSLDAYLLKP
VQRITKYQLMLKEMLKCSKNQEGTAELEEALATMLDIIKSVNDSMHQIAITGFEGNLSEL
GKLLMQGSFNVWTDHKKGHSKVKDLARFKPMQRHLFLYNKMLLFCKKREETTDEKPSPSY
SFKHSLKMSAVGITENVKGDIKKFEVWYNGREEVYIIQAPSMDVKNMWVSEIRKVLTGQL
EACREASQLHQKITENVYHAPMRNMRKMALRQSDSSSPETGFRRSNPSPNMRQKRAEASA
TNNPDHNAALARKRFTLQGLSNRRSLPSADPPSKVTDVTRRFSLASSISVSATRRTKGPP
STHVKKTKRHEIKSDPTPFGYEDTLRSAIPAASRHKGTTSTESAVPRSTSQPGWTQRCLP
SMDTEDFETIHSSAEELSNSSDGEDQSSNKNGDNDRFRVQLTYESRTAQDLSLESGDLVQ
FLDEAENGHWLVKNLITQKTGLVPPSVLQTAAEGGHSYCNTTDIFSDMCTAALSDSEDNE
TSTWGDVSQESR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcacccacacactcacagaaacacacacagtaaggaatctgctctgcgcggctctcca
taccacagagtcctcagggcaggactgtcggtctggtccagacaggaagacctcaccatg
ggctcagttatgtatgagatcatgcagcaggagatcaggcccctgcttgctgtcgacatc
atagagcagctgcatcggcagtttgccctgctctcgggaggaagagggaaagatggcgcc
cccatcatcaccttccctgaatactcaggcttcggcgacctcctagacgaggacttccag
aatgttgtcacatatctgactagcatccccagtttggacgctgccagcatcggtttcgtt
ataatcattgaccgcaggcgggacaaatggagctcagtgaaggcctcgctgacgcggatt
gcgggggcatttccagggaacctccagctggtgttggtgctgaggccctcccgtttcttc
cagagggccgtcgctgacataggcatgaagctgcaccgggatgactttaaaatgaaggta
ccgattgtgatgctgaactccctgtctgacttacatggctacgtagataagggccagcta
acatgtgagcttggtgggaacctggagtactgtcacagtcagtggatccaccaccggaca
gccattgagaactttgctgtgacagtgaagaccacagcccaaatgctgcagaagtttggc
acagatctgtccgagacggagctgcctaatgacgtgcagtacaccaaagacctgctaacc
actcacactgagaagcatgacaaactaaaggatgaactgaaattagcggtgcaacagggg
actactctgctgggctgtatcaaagagcaggccgcgaagtctgagaaccacaaactaaac
ccagacgagatggaaaaccagactacagtggaaaggttgttggcccagctggatgagaca
gaaaatgcttttcaacagttctggtccaaacattacctcaaactggagcagtgcctgcag
ttacgccattttgaacatgacttccgagaggtgaaagtgtcattggacagtctgatggac
actctgactttcctgtcagatattggggactgtgtcacccgagtggagatgttactgaac
gacctcaataccttagaggagaaggctcaggagtcgttagagaaggcccagctccatgcc
ctacacggggaccagctgatccagagcaaccactatgctgtggactccatacggcccaag
tgtgtggagctccgacgcatctgtgacaacttcaccaacgaggccaagaagaaatatgac
atcctctccaaatcaaaccaaatacacaaaggcatagacaaggtgaaccagtggtgtgag
tcgggggtgtatctgctggcctctcaggcagtggacaagtgccagtcccaggatggagct
gaggcagcgctgcaggacattgagaagttcctggagacggccaaggagaaccaactgagt
gacctcaagaacatccacaaccagtatgagctagtcctcaacgctgaagtcaaggctaat
gtaaagaaggctctaaaaaggttggacgatgtacaggagatgtttgagaagagacaggtc
agtctgaagaagctgtcagccaaacagacacggcccgtccagcctgtggcaccccggcct
gagtcctctcccaatcgccccgcgctctccaaaacacccaggaccaccggccctgcccct
gcactcagtcgaaggacctcagagaactccagtgccacaaagcagcccatggaggctgag
ctcgccaaaaagaaaaatttaagtcgcaaagtcaaagggagcctcaagattgaggtaatg
catgaggcaagccagggaggctccagccacatcctggtgacgaacgagacagaagagagt
ctttcaaccaggcggagacacatcatgaatgagctgattgaaactgagaggctgtacgtc
gaggagctgcagagcatcatggaggggtatgctgccgagctggacaacacagagctttcc
cacctaatccctacagcactggagaacaagaaagatgtgctttttggcaatctcccggaa
atatatgaatttcacaacaggacttttttcaaagagcttgaaaattgcatggagaggcca
gagttggtggggacttgctttttgaaaaggaaagaagagctgcagatctatgagaaatac
tgtcagaacaagccccgatcagaggcactgtggagacagtgtggtgacggcctgtttttc
caggagtgtcagaagaagctggaccacaaactctccctggatgcatatttactcaagcct
gtgcagaggatcaccaagtaccagctgatgctcaaggagatgctgaaatgcagtaagaat
caggagggtactgctgagttggaggaggccctggccaccatgctggacatcatcaagtct
gtcaatgactccatgcatcagatcgccataacaggatttgagggaaaccttagtgagctg
gggaagcttctgatgcagggctcgttcaacgtgtggacggaccacaagaagggccacagc
aaggtgaaggacctggctcgcttcaagcccatgcagaggcacctgttcctctacaacaag
atgctgctcttctgtaagaagcgggaggagaccacggacgagaagccatccccctcctat
agcttcaagcactcactaaagatgagtgccgtgggaattacagaaaatgtcaaaggagac
attaagaagtttgaggtctggtataacggcagagaggaagtctatattattcaggctccc
tccatggatgtgaagaacatgtgggtgtcagagatccgaaaagttctgacgggccagctc
gaagcttgcagagaggctagtcaactccatcagaagatcactgagaatgtgtatcatgct
cccatgagaaacatgcgcaaaatggccctgaggcagtcggactcgtctagcccggagaca
ggcttcaggaggagcaaccccagccccaacatgagacagaaacgagctgaggcttctgca
actaataaccctgaccacaatgctgctctcgctagaaagcgcttcaccttgcagggcctc
tccaatagaaggtctcttccctcagccgatcctccatctaaggtgacagatgtcacgcgc
cgcttctctttagcctcctctatcagtgtctccgccaccagacgcacaaaaggtcctcct
tcaactcatgttaaaaagaccaaaagacatgagataaagagtgatccaacaccattcggt
tatgaagatacattacgcagtgctatccctgctgcgagcagacacaaaggcaccacaagc
actgaatcagctgtgcctaggtccacttctcaaccaggctggacccaacggtgtttgcct
tcaatggacacagaggactttgaaaccatccattcgagtgcagaggagctctccaactct
tcagatggtgaggaccagtccagtaataaaaatggggacaatgatcgcttccgtgtccag
ttgacgtacgagtcgaggacagcgcaggacctgtctctggagtcaggagatttagtacag
ttcctggatgaggcagagaatggacactggctagtcaagaatcttattactcagaagaca
ggtctggtaccgcccagtgtacttcagacagcagcagaaggaggtcactcatactgtaac
actactgatatcttcagtgacatgtgcacagcagctctgtctgactcagaggacaatgaa
accagtacgtggggagatgtatctcaggaaagtagataa
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integrated database retrieval system
