Oncorhynchus tshawytscha (Chinook salmon): 112251035
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Entry
112251035 CDS
T05605
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A isoform X1
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00601
Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100
Metabolic pathways
Module
otw_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
otw_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112251035
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112251035
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
112251035
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
112251035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
112251035
NCBI-ProteinID:
XP_024277444
UniProt:
A0A8C8GH90
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Position
LG05:complement(60608081..60616173)
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AA seq
372 aa
AA seq
DB search
MFMNFRRIRRCQCVQLVMTGFVLSVLMVCWVQLDHHVENRYLVNSYDFINKSFGISQQES
ESLSNFLYLINHHDKCNSNEVLLLLFVKSSPENLERRQAIRATWGNENYIQRELGANVRV
LFALGVYSNPQQRGSVQRGLLREDQVYGDLVQQDFVDTFHNLTIKLLLQFRWRHTYCSKA
RFLMSADDDIFVHMPNLVHYLQGLIQQGARDLWVGHVHRGAPPIRQKDSKYHVPYEMYQW
PSYPDYTAGAGYVVSRDVAAKIYQATLFLNASLYIDDVFMGICANAMGVSPQEHVYFSGE
GKAPYHPCIYDKMITSHGHVADVRRLWKAAMDPQIHDISSGQVGKLYCTAVKIMLLCKPY
YLNTYPCKAAFS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgaatttcagaaggatcagaagatgtcaatgtgtgcagctggtgatgacaggc
tttgtcctgtctgtgttgatggtgtgctgggtgcagctggaccaccatgtggagaaccgt
tacttggtcaacagctatgacttcatcaacaagagctttggcatcagccagcaggagtcg
gaaagcctgagcaacttcctgtacctcatcaaccaccatgacaagtgtaacagcaatgaa
gtgctgctgctgctgtttgtcaaatcttccccagagaacctggagaggaggcaggccatc
cgggccacctgggggaatgagaactacatccaaagggagctgggggccaacgtgagggtg
ctgtttgccctgggggtctactcaaacccccagcagaggggcagtgtgcagagagggctg
ctgagggaggaccaggtctatggggacctggtccagcaggactttgtggacacctttcac
aacctcaccatcaaactgctgctgcagttccgctggagacacacctactgcagcaaagct
cgcttcctcatgtcagccgacgacgacatctttgtccacatgcccaacctggtgcactac
ctgcagggcctgatccagcagggggcccgggacctctgggtgggccacgtgcacagggga
gccccccctatccgccagaaggacagcaagtaccacgtgccttatgagatgtaccagtgg
ccctcctacccagactacaccgcgggggcagggtacgtagtctcaagggacgtggctgcc
aaaatctaccaggcaactctgttcctcaatgcctcgctgtacattgacgatgtgttcatg
ggcatctgtgccaacgccatgggggtgtctccccaggaacatgtttacttttcaggggaa
gggaaggccccctatcacccctgcatctatgataagatgatcacctctcacggacatgtg
gcagatgtccggcgcctgtggaaggcagctatggacccacagattcatgacatttcctct
ggccaggtgggaaagctgtactgcacagcagtgaaaatcatgctcctctgtaaaccttac
tatttaaatacctacccatgcaaggcagccttttcatag
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