Oncorhynchus tshawytscha (Chinook salmon): 112251037
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Entry
112251037 CDS
T05605
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112251037 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251037 (nlgn1)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112251037 (nlgn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
112251037
NCBI-ProteinID:
XP_024277453
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All DBs
Position
LG05:60794652..61137413
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AA seq
846 aa
AA seq
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MPLQRHGRLRLHPAWRVMQPRLGVGLGLGLDLTFLLWILSLAQQALVTASQKLDETDPVV
TTVYGKLRGVKKELNNEILGPVIQFQGVPYAAPPTGERRFQPPEPPISWPEVRNATQFGP
VCPQTIVEGRLPDVMLPVWFTNNLEIVSSYVQDQSEDCLFLNIYVPTEDGPLTKKHNDDL
GDNDGAEDEDIRESGSPKPVMVFIHGGSYMEGTGNMFDGSILASYGNVIVITVNYRLGVL
GFLSTGDQASKGNYGLLDLIQALRWTSENIAFFGGDPLRITVFGSGAGASCVNLLTLSHY
SEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLAKKVGCNLKDTVDLVECLQ
KKHYKELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKF
VELIVDNENGVQANDFDYAVSSFVDDLYGYPEGKDILRETIKFMYTDWADRHNPETRRKT
LLALFTDHQWVAPAVATADLHSSFGSPTYFYAFYHHCQTDQVPPWADASHGDEIPYVFGL
PMIGPTELFPCNFSKNDIMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAW
TRYNQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHSLNEVTQIISTTTKVPPPEVT
PRTPKKIPVNTKRPNPTPFPTETQDSQNQPFLVDQRDYSTELSVTIAVGASLLFLNILAF
AALYYKKDKRRHDVHRRCSPQRNTTNDLAHTQEEEIMSLQMKHTDLDHECDAMHPHKVVL
RTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTMQGRQSLHNFNTFPSSGQNNTLPHPHS
HSTTRV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcagaggcatggccgtctgaggctgcaccctgcctggagggtcatgcagccc
cggctgggcgtaggcctgggtcttggcctggacctcaccttcctgctatggatactgagc
ctagcacagcaggccctggtcacggcctctcagaaactggacgagacggaccccgtggtc
accaccgtctacggcaaactgaggggcgtcaagaaggagctcaacaacgagatcctggga
cccgtcattcagttccagggggtaccttatgccgcaccccccacgggcgagaggcgcttt
cagcccccggagccgcccatctcgtggccagaggtccgtaacgccacgcagtttggcccg
gtctgccctcagaccatcgtggaggggcgtctgccagacgtcatgctgcctgtgtggttc
actaacaacctggagatagtgtcttcttatgtacaggaccagagcgaggactgccttttc
ttaaacatatatgttcccactgaggatggtccccttacaaagaaacacaatgatgattta
ggtgataatgacggggcggaggatgaagacatccgtgaaagcggtagccccaagccagtg
atggtatttatccatgggggatcctacatggagggcactgggaatatgtttgacggcagc
atcttggcaagttacggcaatgttatcgtcatcacagtgaactaccggcttggagtatta
ggtttcttaagcactggggaccaagcttccaagggaaactacggactccttgatctgatc
caagctctgcgctggactagcgagaatattgctttctttggtggtgaccctttacgaata
actgtttttggatcaggggctggcgcctcctgtgttaacctcctgaccctgtcccattat
tctgaaggtaaccgttggagcaattcaaccaaaggacttttccagagagctatagcacag
agtggaactgcgttgtccagctgggccgtcagcttccagcctgctaagtacgctcgcatg
ttggccaagaaagtgggctgcaacctgaaagacacggtggacctggtggagtgtctacaa
aagaagcactacaaggagctggtggatcaggacatccagcctgcacggtaccacatcgcc
ttcgggcctgttattgacggtgacgtcatcccagacgaccctcagatcctcatggagcag
ggcgagttcctcaactatgacatcatgctgggggtcaaccagggcgagggcctgaagttt
gtggagcttatcgtagacaacgagaatggcgtccaggccaatgattttgactacgccgtg
tccagcttcgtggatgacctgtacggttacccggagggaaaggacattctgcgggagacc
ataaaattcatgtacacggactgggctgatagacataacccagagaccagaaggaagacc
ctactagccctgttcactgatcaccaatgggtggctccggctgtggccacagcagacctc
cactccagctttgggtcgccaacgtacttctatgccttctaccaccactgccaaacagac
caggtgcccccctgggcagacgcttcccacggcgacgagatcccctatgtgtttggcctg
cccatgattggccccacagagctgttcccctgtaacttctccaagaacgacatcatgctc
agtgctgtggtgatgacctactggactaattttgccaaaactggtgacccaaaccagcca
gtcccccaggataccaagttcatccacaccaagcctaaccgcttcgaggaggtggcatgg
acgcgctacaaccagaaggaccagctgtacctccacatcggcctgaagccccgagtcaag
gagcactaccgagccaacaaggttaacctgtggctggagctggtgccccacctccacagc
ctgaacgaggtcacccagatcatctccaccaccaccaaggtccccccaccagaggtcacc
ccgaggacaccaaagaagatccctgtcaacaccaagaggcctaaccccactcccttcccc
accgagacccaggacagtcagaaccagccctttctggtggaccagagggactactccaca
gagctgagcgtcaccattgccgtgggcgcctcgctgctcttcctcaacatcctggccttt
gcggcgctctactacaagaaggacaagcggcggcacgacgttcaccggcgctgcagcccc
cagcgcaacacgaccaacgacctggcgcacacgcaggaggaggagatcatgtccctgcag
atgaagcacacggatctggaccacgagtgtgacgccatgcacccacacaaggtggttctg
agaactgcctgcccgccagactacacgctagccatgcgacgctctcctgacgacatcccc
ctcatgaccccaaacacgatcaccatgatccccaacaccatgcagggccgccagtccttg
cacaacttcaacaccttccccagtagtggacagaacaacaccctgcctcacccacactca
cactccaccaccagggtatag
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