Oncorhynchus tshawytscha (Chinook salmon): 112251045
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Entry
112251045 CDS
T05605
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00280
Valine, leucine and isoleucine degradation
otw01100
Metabolic pathways
Module
otw_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112251045
Enzymes [BR:
otw01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
112251045
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_ST
Biotin_lipoyl_2
BT_MCC_alpha
RimK
ATP-grasp_3
ATP-grasp_4
NQRA_N
Ntox43
RnfC_N
Motif
Other DBs
NCBI-GeneID:
112251045
NCBI-ProteinID:
XP_024277470
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Position
LG05:61851211..61859838
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AA seq
721 aa
AA seq
DB search
MASVLNVQTLQGLRIFQQSVSCLVLLLSHLRKLIWTKGFVRFASIGQGRIEKVLIANRGE
IACRVMRTAKKMGVRSVAVYSDADRHSMHVAMADEAYNIGPAASQQSYLSMEKVMEVAKR
SGSHAVHPGYGFLSENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIE
GYHGEDQSDEKLQAEAVRIGYPVMIKAVRGGGGKGMRIAHTTEDFHEQLESARREARKSF
NDDVMLVEKFVEDPRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISKEVR
RKLGEAAVRAAKAVNYVGAGTVEFIMDAQHNFFFMEMNTRLQVEHPVSEMITGTDLVEWQ
LRVAAGERLPLLQEEIELMGHSFEARIYAEDPNNDFLPGAGPLLHLSTPLADECTRIETG
VREGDEVSAHYDPMIAKLVVWGEDRSAALRKLRYCLRQYNIVGLNTNIDFLLSLSGHPEF
EAGNVTTSFIPQHYEQLFPKPIPPSRATLCQAALGLLLRERASTQTFRDQSNDPFSPFAS
SNGRRVNILYSRNMMLQLGETKVELTVTYNPDGTYSMEIGGEVFQVSGEVETQGQTSFLH
CSVNGVKSRPKLVILDNTVHLFSMEGSAEVSIPVPKFLAGVSTGAQGGAVAPMTGTIEKV
LVKAGDTVQMGDSLMVMNAMKMEHIIRAPKAGVIKKVFFKDGSQANRHAALVEFEEAAEE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtcctgaatgttcaaaccctacagggtttaagaatatttcaacagtccgtg
tcctgccttgttcttttattatctcatcttaggaaattgatatggaccaaaggatttgtg
cggtttgcctcaattgggcaaggcaggatagaaaaagtcctcattgccaacagaggagaa
atcgcctgccgtgtgatgcgaacagcaaagaagatgggtgtgcgctctgtggcagtatac
agtgatgcagatcgtcattccatgcatgtggccatggcagatgaggcctataacattggg
ccagccgcatcccagcagagttacttgtccatggagaaagtcatggaggttgccaagaga
tctggatcacatgctgtccacccaggatatggcttcctgtcagagaacacagagtttgct
gaggcatgcaaacaggagggtatcatctttattggccctccatcatctgctatcagagac
atgggtatcaaaagtacatcaaaatacataatgtcagctgcgggtgttcctatcatcgag
ggttaccacggagaggaccaatcggatgagaagctccaagctgaggctgtcaggataggc
tatccagtgatgataaaggctgtgcgtggcgggggtggtaaaggaatgcgcattgcacac
accactgaagacttccacgagcagcttgagtctgcgagacgagaggctcgcaagtccttc
aatgatgatgtcatgctagtggagaaatttgtagaggaccccagacatgtggaggtccag
gtttttggggaccagcatggaaatgctgtctacctgtttgagagggattgcagcgtgcag
agaaggcaccagaagatcattgaggaagcaccaggtcctggaattagcaaggaggtgagg
cggaaactgggtgaggcagccgtgagagcagccaaagccgtcaactatgtgggagcaggc
actgtggagttcatcatggatgcacagcacaacttcttcttcatggagatgaacacgcgt
ctgcaggtggagcaccctgtgtctgagatgatcactggtactgacctggtggagtggcag
ctcagagtggctgcaggggagaggctgcccctcctgcaggaggagatagaactgatgggc
cattcgtttgaggccaggatatacgctgaggaccccaacaacgacttcctccctggggca
ggacccctccttcatctgtcgacacccctggcagacgagtgcacacgcatcgagacaggc
gtcagggaaggagatgaagtgtcagcccactacgaccccatgatcgctaaactggtggtg
tggggagaggaccgctctgctgctctgaggaagctcagatactgcttacgtcagtacaac
attgtaggcctcaacaccaatattgacttcctgctgagtctgtctggccacccagagttt
gaggcggggaatgtgaccaccagcttcatcccccagcactatgagcagctgttccccaag
cccatccctccctccagggccacactgtgtcaggctgccctgggcctgctgctcagagag
agggccagcactcaaaccttcagagaccagtccaatgatcccttctctccttttgcctcc
agtaacggcaggagggtgaacatcctatatagtaggaatatgatgctccagctgggtgaa
actaaagtggaattaacggttacatataatccagatgggacctactctatggagattgga
ggggaagtgttccaggtgtcaggggaggtggagacacagggacagacatcattcctgcac
tgctctgtgaatggggtgaagtcccggcccaaactggtcatcctggataacacagtacac
ctcttctctatggagggtagtgcggaggtgagcattccagtacccaagttcctggctggt
gtgagcacaggagcacagggaggagctgtggcacccatgactgggaccattgagaaggtg
ctggtgaaggcaggagacacagtacagatgggagactccttgatggtgatgaatgccatg
aaaatggagcacatcatccgagcacccaaagctggagtcatcaagaaggtgtttttcaag
gatggctcccaggccaaccggcacgcagccctggtagagtttgaggaggccgctgaggag
gaataa
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