Oncorhynchus tshawytscha (Chinook salmon): 112251061
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Entry
112251061 CDS
T05605
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112251061 (si:dkey-183n20.15)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112251061 (si:dkey-183n20.15)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112251061 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112251061
NCBI-ProteinID:
XP_042178133
UniProt:
A0AAZ3P5P7
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All DBs
Position
LG05:62128177..62136597
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AA seq
259 aa
AA seq
DB search
MSVYSHQTYTSSCQMNQTMHTSHSSHPRCDPLPEVTVGQGHLGSSSEHTQDRTSLKHVTY
SKNSSQICPSAGHRDWLCPVCLQTASFPVKTNCGHLFCAPCLISYWRHGSWLDAINCPLC
RQKVKVLCRLFSKGWSDSKEREVLGEITDYNKRYSGAPRKVTDYLCDTPLFLQLLIRRLG
TMGGLVFLFFLRVALCCLGTVVSLASPPLDTPPSLSDLLGVLDDLVVVFLLLICVININQ
QMAPDSGNSSAHTGGRPVQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttacagccaccagacctacacttccagctgccagatgaatcagaccatgcac
acctcacacagctctcatcccagatgtgaccctctgcctgaggtcacagtgggtcagggt
cacctaggatcgtcctcagaacacacacaggatcgaacatccctcaaacatgtgacctac
agcaagaactcctctcagatctgtccatctgcgggccacagagactggctctgccctgta
tgtctacaaactgccagcttccccgtaaagaccaactgtggccatctcttctgtgctccc
tgtctgatctcctactggagacatgggtcctggctggacgccataaactgccctctgtgt
agacaaaaggtcaaggtcctgtgtcgtctgttcagtaagggttggtcagacagtaaagag
agggaggttctgggagaaatcacagactacaacaaacgctactcaggagcccctcgaaag
gtgacagactacctgtgtgacacacccctgttcctgcagctgctaatccgccgcctgggc
accatgggggggctagtgttcctcttcttcctccgggtggcactttgctgcctagggact
gtggtgtccctcgcctcaccccccctggacactccaccctccctgtctgacctcctgggg
gtcctggatgacctggtggtggtcttcctgctgctcatctgtgttatcaatatcaaccag
cagatggcaccagatagtgggaactcctcagctcacacagggggtaggcctgttcagtaa
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integrated database retrieval system
