Oncorhynchus tshawytscha (Chinook salmon): 112251080
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Entry
112251080 CDS
T05605
Name
(RefSeq) vesicle-associated membrane protein 4 isoform X1
KO
K08513
vesicle-associated membrane protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112251080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251080
Membrane trafficking [BR:
otw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
112251080
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
RIFIN
ATG16
DUF2721
MCU
DUF5345
Ferlin_C
Fzo_mitofusin
DUF4407
Motif
Other DBs
NCBI-GeneID:
112251080
NCBI-ProteinID:
XP_024277532
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All DBs
Position
LG05:62958821..62993810
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AA seq
154 aa
AA seq
DB search
MREPEREEQPEDAIMPPKFKRHLNDEEVTGSICSERRNLLEEDSDEEDDFFLRGPTGPRF
GAGSDKIRQVQSQVDEVIDVMQENISKVIDRGERLEDLQDKSESLSDNASAFSTRAKQLH
RRMWWRDMKMKAIIALVVVVLLLIIIIPVILRYR
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgagggagccagagcgggaggagcaacctgaagacgccatcatgcctcccaaattcaaa
cgacacctcaatgatgaagaggtcacaggatccatatgcagcgagaggaggaacctgctg
gaggaagactctgatgaagaggacgacttcttcttgaggggaccaactggacccagattt
ggagctggaagtgacaaaatcagacaagtgcagtcgcaggttgatgaggtcatcgatgtg
atgcaggagaacatctccaaggtgatcgacaggggagagcgacttgaggacctgcaggac
aagtcagagagcctatcagacaacgcttcagcctttagcaccagagccaagcagctgcac
aggaggatgtggtggagagatatgaagatgaaggccatcatagctctggtggtggtcgtt
ctgctacttatcatcatcattccagtgatattgcggtatcgctag
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