Oncorhynchus tshawytscha (Chinook salmon): 112251095
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Entry
112251095 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112251095
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112251095
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112251095
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112251095
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112251095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112251095
NCBI-ProteinID:
XP_042178158
LinkDB
All DBs
Position
LG05:63698674..63739416
Genome browser
AA seq
2618 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPCGDGETTGRTGTGGFDPPPAYHDVVESERSNDENGNCSGGSMEFPTTNLYELESRVF
TDHWSIPYKREESLGKCLVAATCLAKHGLADADENCKRFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKQEPIPVGLMGVLAMAFNPDNEYHFKNRMKACQRNWS
EVFGEEAMFAVSPSNNYQKEPHGWLVDLVNLFGEMGGFTAIQAKLNTEEIEIGCVSALVQ
PLAVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TALVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNFEQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QTSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGNNGLTGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATTMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETIGSIRWKIAEHLNCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSVSASSSSSAVFNSAYAMEQEKSLPGVVMAL
VCNVFEMLYQLANLDEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GQGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEM
AKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMP
SLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAA
RVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLVVRSRVSSTG
SNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYNLP
CVSDFIIDILLGSASGEIRRVACDQLYTLSQSDTSAFPEIIKPNVFLLRVVLTSQLPLWS
PTSVMRGVNQRLLSQCTEYFELRCQLLDDLTSSEMEVLSVSAAAMLEDEISWLDNFEPSW
SSEMETSEADNILQAGHLRLIKTLLSLCGTEKELLGPSLIQQLLDDFLFRASRIILNTSD
PASSSPPSHDFHPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSKE
FDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFC
QVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIS
REQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEG
TNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNME
PYTVSGMARQDGGAEGGDGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKD
RRSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLF
YQRISDQNSPVLPKKSRVSAMRQEAEDLTLSAPSSPDVSPQSSPRPPRANNDRLSVLTRL
VRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPAY
QAMARESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVDVLLSKSSEACHWMAQYLVGPEG
REITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVKH
CNQYFSLFSNFAQRGSGPCQLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHLH
STLALMTLHSDLNTQHTHDQGVCKLNVSSVPASSSLLQLDADIMASLFTHEGQPYLLEVM
FAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLVV
EDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCVPAKDYFKDLSG
HWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGSS
NGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7857 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggagcaacacatgacgaccctcctctgcatgggtttcccagatcct
gtggctatacgcaaggcgctacgcctggcgaaaaacgacatcaacgaggctgtggcgctc
ctgaccaacgaaagccccgggcttgggtatggatatgagccgatggagagtggccctgcc
ccgggcccatgcggagacggggagaccaccgggcggactgggactggagggttcgaccca
ccccccgcttaccacgatgtggtggagagcgagaggagtaatgatgagaatgggaactgt
tctgggggcagtatggagttccccaccactaacctgtatgaactggagagcagagtgttc
actgaccactggtcaatcccctacaagagagaggagtcactgggcaaatgtctggtcgca
gccacctgcttagccaaacatggtctggcagatgcagatgagaactgtaagcggtttatg
gaccggtgtatgcacgaggcctttaagaagctcctgaccagtagtgctgtccataagtgg
gggacagagatccatgaggggatctataacatgttgatgttactggtggaactggtggct
gagagggtcaaacaggaacccatacctgttgggctaatgggagtactggctatggccttt
aacccagacaatgagtaccactttaaaaaccgtatgaaggcgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgttcgctgtttcgcctagcaacaactaccagaaggag
cctcatggctggctggtagacttggtcaatctgtttggagagatgggagggttcactgct
atccaggctaaactcaatacagaggagatagagattgggtgtgtgtctgctctggtccag
cctctagctgtgtgtgcagaatacctcaactccagccttgtgcagcccatgttggatcct
gttatccataagatgatcacctatgttcagaaccttgaggagaaagatctcaaagacaag
aggctggtgagcatcccagagctgctgtcggccatcaagctgctgtgtatgaggttccag
actgccctggtaactgttgtggacgacctacgcctggacactctgctacgcatgttgaag
actcctcacttttccaccaaaatgaactccctcaaagaggtgactaagctgatcgaggag
agtactgtgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtggaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgagttgctgggcagtaaactgtctctggacgagctctcc
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcggctgccgtcaagttcaacttcgagcagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggcgaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgccaactctgcccacctccctggtacagcaggcgtctgaggaacac
ctggccatcctcactgacgcgtacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaggacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagacctcatttcttactggctcctggggcaagaagaaagccaaagaaaactcattggcc
aaatcttctcaacagggcagtccccaggcggtctgggtggttccagctctgcggcagctc
catgagatcacacgctccttcatcaaacagacctaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagatcgtcaaactgattacaggatctctggtggtc
tgccatcgactagcggtgtctgcagctgggaacaacggactgaccggacacacactagtg
gacggacgatacacctaccaggagtatctagatggccacctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggactgcctg
gtctctggacccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctcttcaaagagaagatcctcaaa
ctggagccctacgagattactatgaatggctttaatctgtttaagaccttctttgagaat
gtcaacttgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggcta
gacctggctgggatggactttatctggcgtatcgccatggaaacgcctgatgaggagatt
gctaacgaggccatacagctaatcatcacatacagctacaccaacctcaaccccaaaatg
aagaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggagggcccacgttgactcatgctgttaccagggcaaccaag
atgctgaccgccaccaccatgccgactgtagccacgtctgtccaatcaccttccaggtcc
accaagctggtgatcattgagaggctgctgctattggctgagcgttatgtcatcactatc
gaggacctgtactctgtgcctcgtaccattttacctcacggagcgtcgttcaacggccac
cctgtctctctacacgtcacctatgagtccaccaaagacaccttcaccttggaggcccac
agtaacgagactataggcagcatccgctggaagattgctgagcatctcaactgtccagtc
gacaacgttcagatctttgccaacgacagcgtgttgactatgaaccgggaccagaagctg
ctgtcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acaccctctggtggcagctcagagtcctccgtctccgcttcctcctccagctctgctgtc
ttcaactcagcttatgctatggaacaggagaagtcccttccaggtgttgtcatggcattg
gtgtgtaatgtgtttgagatgctctaccagctggccaacctggacgaaccacggataact
ctgcgtgtacgtaagctgctgctgctgatcccaacagacccagaggttcaggacgctcta
gataactttgttcccaaagagtccagtgtctggagtcaccagaagacattgttcaccctg
ggtcaggggtcaggctctcggtctccgtctctgggttctaagcagcagcaccagcccagt
gctgcctccatcttggaatcactcttcagatcctctgctcccgggatgtccaccttcaga
gtcctctacaacctggaggtgttgagttctaagttgatgccgacctccgatgacgagatg
gctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttg
gtggtgaacgtgatgcagcgggactctattccctctgaggtggactatgagaccagacag
ggagtctactccatctgtctacaactggccaggttcttattggttggccaaagtatgccg
tcgttgctggatgatgatgtcatccgagagggtgacactctatctagtcggccattccgt
aacgcagggcgaccagggagacagctgtcactgtgtggaacgcctgagaagagctcctat
agacagatgtctctgtctgaacgctcctctatcagagtagaggagatcatccctgctgca
cgcgtagctatacagacgatggaggtcggggacttcacctcgacggtggcgtgtttcatg
cgtctaacctgggcggcagccgccggccgattggatctcgtcggcagtcctcagccaatc
agacctgaacacagctcactactccccctcgtggtccgcagccgtgtcagcagcactgga
agtaactgcagctccagcagtgagggcgaggcgccgcccacagcgttgcatgctgggata
tgtgtgaagcagcagagtgtttctattaaagactgcatcattgctagagaggccctgtct
ctactggtcacctgcctacagctacggacacagcagctagggtcattctacaacctcccc
tgtgtcagcgacttcatcatcgacatcctgctgggatcagccagtggagagatccggcgt
gtggcgtgtgaccagctgtacactctgagccaatcagacacgtctgcgttccctgagatc
atcaagcccaacgtgttcctgctgcgagttgtcctcacctcccagctgcctctctggagc
cccacgtctgtcatgaggggagtcaaccagaggttgctgtctcagtgtactgaatacttt
gaactgcgatgtcaactactggatgacctgaccagttcagagatggaggtgttgtcagtg
agtgcggcagccatgttggaagatgagatcagctggttggataactttgagcccagctgg
agctctgagatggagactagcgaggctgacaacatcctgcaggctggacacctccgcctc
atcaaaacactactgtcactctgtggcaccgagaaggaactcctaggtccttctctgatc
cagcagctgttggatgacttcctgttccgagcgtcccgcatcatcctgaacacgtctgac
cccgcctctagctccccccccagccacgacttccaccccaagtgcagcacggccagcagc
agattggcagcctacgaggtgctggtgatgctagcagacagctctgtggccaacctacag
cttatcaccagagaactgctgtccatgcaccaccagtcagacccctcgctcagtaaggag
tttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtagggttaaagaac
ggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggcctg
gctgaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttctgt
caggtccagtctctgttcggacacctgatggagagcaagctgcagtactatgtccctgag
aacttctggaagatctttaagatgtggaataaggagctgtatgtacgggagcagcaggat
gcctatgagttcttcacttcactggtggaccagttggacgagcacctcaagaaaatcagc
cgtgagcagatcttcaagaatactttccaaggaatcttctctgatcagaagatctgcaaa
gactgccctcaccggtatgagcgagaggagacgtttatggcgctgaacctgggtgtgact
tcctgtcagagtctggagatctcattggaccagtttgtcaggggggaggtgctagaagga
accaacgcctactactgcgaaaagtgcaaggagaagcgtaccacagtgaagcggacctgc
ataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggcttcgactgggag
agcggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggag
ccctacacagtgtctggcatggctcgtcaggatgggggggcggaggggggagatggccgg
ggcgaggcagggggctcacccaggaagaaggtgaccatctcagagaactacgaactggtg
ggagttgtagtccacagtggacaggcacacgctggacactactactccttcatcaaggac
agacgcagtgctaggggaaggtggtataagtttaatgacaacgtggtggaggagtttgat
atgaatgacgagactctggagtacgagtgctttggaggagagtatcggcctaaagtctac
gaccagtctaacccctaccctgacgtgcggcggcggtattggaacgcctacatgttgttc
taccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagtgcc
atgaggcaagaggcagaagacctcacactttcggcaccctctagcccagatgtcagtccc
cagtcgtcccctcggccccccagggccaacaatgaccgtctctctgtcctgacccgcctc
gtacggaagggagagaagaaaggactgtttgtggagaagatgcctgctaggatctaccag
atggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgactac
ttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcctac
caggccatggccagagagagtctccagttggcggtccacttcctgttccacacctacctc
cacaccaagaagaagctgcgggtggacacagaggagtggatggctacggtggatgtgctg
ctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgaggga
cgagagatcaccaaggtgtgtctgttggagtgtggggtgagggaggtgagggtcgtagtg
gcagccatcttggagaaaaccttagagagtgctctccacttcgctgactctggattggac
agcctgaccgatgcgctcctctccctattggacaaagacgttcctgagaacgtcaaacac
tgcaaccaatacttcagcctcttcagcaactttgctcagaggggctctggtccgtgccag
ttgttgttgaaacactcagcgtatcgcaggatgctcatcttcctcctcggacccaacaga
cagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctgcac
tccactctggccctgatgactctccactcagacctcaacacacagcacacacatgatcaa
ggtgtctgtaagctgaatgtgagcagtgtccctgcctcctccagcctcctccagctcgac
gctgacatcatggcctcgctcttcacccatgagggacagccttacctgctggaggtgatg
tttgcggtgcgggagttgtccggccctctgactgtgctgatagagatggtgacatactgc
tccttctgtaatgagcccttctccctgggagtactacagctgctcaagactcagttggag
accgctccgccccatgagctgaagaacgtgttccagctactgcaggagctgctggtggtg
gaggatcctcttcaaactcagagactgaagtacgccttcgagtcagagaaaggtctgcta
gcattgatgcaccagagtaacaatgtggacagcagccgctgctatcagtgtgtcaagttc
ctggttaccctggcacagaagtgtgttcctgctaaggactattttaaagatctgtctggt
cactggagctgggcagtgcaatggctgcagaaaaagatgtcggaacactactggactcct
cagagcaacgtgtccaatgagacgtccacagccaaaacattccagcgcaccatctcagcc
caggacacgctggcctacgccacagcactgctcaacgagaaggagccatctggcagcagc
aacggctctgacggtagtccagccaacgagaacgccgaccgcagcctccgacagggttct
gagtctcccatgatgcttggtgattcaaagagtgatctggaggatgttgacccttag
DBGET
integrated database retrieval system
