Oncorhynchus tshawytscha (Chinook salmon): 112251105
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Entry
112251105 CDS
T05605
Name
(RefSeq) F-box/LRR-repeat protein 5 isoform X1
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112251105
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112251105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
Hemerythrin
LRR_6
F-box
LRR_At1g61320_AtMIF1
LRR_At5g56370
DUF6238
LYRM_2
Motif
Other DBs
NCBI-GeneID:
112251105
NCBI-ProteinID:
XP_024277584
LinkDB
All DBs
Position
LG05:complement(64273506..64290777)
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AA seq
692 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSKTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCNVYNVHSDNKLSEMLSLFEKGLRSVKSENEQLNYAQQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDIKKQVIAQHSSQQRWNCAAEVLKGLSLWSQA
EELHKAFKYADHEKTDDELEKELCSAHISHLPTEVLLCLFRYLGPEDLCHCGQVCSAWSD
LAKTGSLWRHLYPVRWARGDYYRGPPDDLNQEPDEEWVKGLQDEGKAYQEWDEDADVDES
DASCEDSLAISAAQREKKLLNGMIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPN
LTHLDLTQTDVTDSAFDSWSSLWACLSLEHLDLSGCEKITDRTLKKLSLGLGDLASPTCS
DRRAKLLKSPPSPISLLDKRSLRPTGHSRQVLIFKQWPGRLGRAPCSPTRVWVLDPLELA
DIEDAAEWNRRRGVSTPEVRGFVETQPGGLSCCCRRRTGGFRTGFSTSYRQQQYGLGEAG
CGHSTCCTGETALRTLGGLQYESHTTRGSAGAEFRTKCSSGGQLCLECDNRTDQSDGRRS
LRFLSLSGCYQVTDLGLRALSQRGGLPHLEHLNLSGCLLITEVGLQELVSACPALNDEHF
YYCDNINGPHADTASGCQNLQCGFRVCCRSGE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttcccgacgaggtggatgttttcactgggccacactggcgaatgaaacag
ttggtgggactttactgtgagaagctgtcaaagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcgctgtgtgctaccttcaaggagttcaagatgcatgaacagatt
gagaatgagtacatcattggcctgttgcagcagcgcagctgcaatgtgtataatgtacac
tccgacaacaagctctcagagatgttgtccctgtttgagaaagggctgagaagcgttaag
agtgaaaatgagcagctcaactatgcccagcagctgaaggaaagacttgaggcattcaca
caggacttcttaccccatatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacttatgaggagctgaaagacatcaagaagcaggtgatagcgcagcacagtagc
cagcaacgatggaactgtgcagcagaggtgctgaaggggctcagtctgtggagccaggca
gaggagctgcataaggccttcaagtatgctgaccatgagaagactgatgatgaattggag
aaagagctgtgctccgcccacatctcccacctgcccacagaggtcctgctgtgtctgttc
cgctacctgggccctgaggacctgtgtcactgtggccaggtgtgctctgcctggtctgac
ctggccaagaccggctctctgtggagacacctctaccctgtacgctgggccagaggggat
tactatcgcggtcccccagatgatctgaaccaggagccggatgaggagtgggtgaaaggt
ttgcaggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtggatgagtct
gatgcatcttgtgaagactccttggctataagtgctgctcagagggagaagaagctacta
aatggaatgatccagaaccttctgccagctgtgggttcctctgtcagatccatcgttctg
gcctacagctctacggtctccagtaagatggtgcgtcagatcctcagtctctgtcctaat
ctcacccacctggacctcactcagactgatgtcacagactccgcctttgacagttggtca
tctctgtgggcatgtctctctctggagcacctagacctttcaggctgtgagaagatcact
gaccgcacactgaagaagctgtccctgggtcttggggacctggcatctcccacctgctct
gaccgacgagccaagcttctgaagagccctccttctcccatcagtctgctcgacaagcgc
agcctccgtccgactgggcacagccggcaggtcctgatcttcaagcagtggccagggaga
ctgggcagagccccctgcagccccaccagggtctgggtcctggaccccttggagctggct
gacatcgaggatgctgcggagtggaaccgacgcaggggagtgtctacccctgaggtgcgg
ggctttgtggagactcagccagggggattgtcgtgttgctgtaggagaaggacggggggc
ttcaggactggctttagcacctcctacaggcagcagcagtatgggcttggggaggccggc
tgtggccattccacctgctgcactggtgagacggccctgaggactttaggagggctacag
tatgagtctcacaccaccaggggcagtgcaggggcagagtttcggactaaatgctcctct
gggggccagttgtgcctggagtgtgacaacagaactgatcagtcagacggtcggcgctca
ctaaggttcctcagcctgtctggatgctatcaggtcacagacctgggcttgagggcactg
tctcagcgtggagggcttcctcacctggagcatctgaacctgtctggatgtctcctcatc
actgaggtggggctacaggagctggtgtcagcctgtcctgccctcaatgatgaacacttc
tactactgcgacaacatcaacggtcctcacgctgacacggccagcggctgccagaacctg
cagtgtggcttcagggtgtgctgccgctctggagagtga
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