Oncorhynchus tshawytscha (Chinook salmon): 112251151
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Entry
112251151 CDS
T05605
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251151
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112251151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Sec66
Motif
Other DBs
NCBI-GeneID:
112251151
NCBI-ProteinID:
XP_024277701
LinkDB
All DBs
Position
LG05:complement(65812295..65852040)
Genome browser
AA seq
1515 aa
AA seq
DB search
MASKEITASCFVSVSRDVTESIRKIIDKSSTKFIRGIKLETKNGKSEDRILVLTTWRLYL
LVTKVPTKIEVTFNFLEIRAMNSHPEHQVVIDTDKSTYSLWLQSRDHLSHVVSHVNFALS
RIFNNSVFAPSICHSDSELSEGSRKHSPSSETSMETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVIVASLAYNTWFTKLYCKDIRIGLEVTE
QVLHTLSKSSSLEEITLENAGLKSDFPQKLSVALSENPASVIHSLNLAHNTLDNQGVANL
IQQVCRLSKGLRLLNLSKTFLNSKALVSQTLCYSDEYSNSLLHLDLSKNPGFLSGEDASN
LCLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSYLNLSKNTFSHRKVKENLPLF
CQFFSSAFSLTHVSLASMKLPPEALRSLFIGLTTNPHINDLHLDISGCELKSAGASVIQE
LFPRLSSIATLDISDNGLDADLLSVLPALSRHTSLKHLYLGKNFNIKSRVLEEILHKLVQ
LIQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDIGAKMLSKALQI
NTTLRSVTWDRNNTSATGFLDVARALEHNFTLQYMPLPLSDISQAYRSTSERTEQALTKI
QRALLRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLSVCVQQQVCVLRGVGEMEEIQAA
KQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDQLAGELTREADKELQVIVDSMVSLC
RELCPLSSSAAERLRPQLSSVSEHVSIPRSAIRTALMERAAQDIHRALEEVKLSVVSYLT
NSIVDQILQELYATHKTLTRRVSQVKRWEVTCDGGTGLRSHRHRDSLDLTDDEMGTSIVS
IDTIAIKKRSSRTRRIRPVSTRLSQCDDSSSSTPPSVSSSFSSFSALSRSTSWEGLSELP
TQGAPLHHVTRVRPRPPRRHRAGHAPSDTHCTENGAVTPIDHGLPDFYTKRVLPDSQLSS
LHKAHSLRRKKRRNMLAIFGFRRNRNSTLSNQGPDSGGDGCGEECRTVAMAPTGTATENV
YTLLQPPLSAARAGSPGEGGDVEDQRLEEPVGLSLQPVQSIPPQPGMPGSRHPFYSLSQQ
SELETEHEQPADIDRQVDKQWTEGNHTVRERTLIRPADRQAEQHWPEDKLSDKTWTEGRT
ADRQMDRYWTESRHADRHMERQWTVDRQFDQDGQWTGSRQQTDRTWAEGRPKDIQIDRQW
IDSRQSGRQTDRQDQGRHLAQRPLPPYPSDRTPSPKSETDSQKNLDRQKYSDTQTDRHLR
SDTAVGQVEGWRDGGGVPPGRVSTSASKPDPPSQSSKPNLSKLRQRHLQESSEEEAGRER
DGGRMERKERDRDAEGQPPPIPEKPKTSSYVSFPNEYANERPIPPPAFRKPLLGLAYRAV
SQGEEAVRPQAPVKPQRNRKAMSCDTGTDRDSPNNLEKPSNRKPPVKKPRLPQNRNKSLD
YPDSVNLASGNNKLL
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagataactgcctcttgttttgtcagtgtgagcagggatgttacagag
agtatcaggaagattattgacaagtcctcaaccaagtttatacgtggcataaagcttgaa
accaaaaatggcaaatcagaggataggatactggttctcacaacatggaggctctatctc
ctggtcaccaaggttccaacaaagatagaggtaacatttaacttcttggagatccgagcc
atgaacagtcacccagagcatcaggtcgtcatagacacggacaagtccacttattccttg
tggctacagtcacgtgaccacctcagtcatgtggtcagccatgttaactttgccctgtcc
agaatatttaacaactctgtgtttgctccctccatctgtcattcagacagtgaactttct
gagggaagcaggaagcactcccccagctcagagacgtctatggaaacccagagggcctgt
ggagggttttcggagacctacgctgccctgtgtgactataatggaatcagctgcaaggag
gaagtgcagtgggatgtggacactatctatcactcccaagacaacagggagtttaatcta
gtggacttcagccacctggaaagcagggacttggcagttattgtggcatcactggcgtac
aatacctggttcaccaaactatactgtaaggacatacgcatagggttagaggtcactgag
caggttctgcacactctcagtaagtcctccagtctggaagagatcactctggagaatgct
ggtctcaaatctgactttcctcagaagctgtcagttgcgctctcagagaatcctgcttct
gtcatccactctctgaatctggcccacaacacactggacaaccaaggtgtggctaacctc
atccagcaagtgtgtcgcctcagcaaaggactgcgtctcctcaacctctccaagaccttc
ctcaactccaaagctttggtgtctcagactctgtgctacagtgatgagtattctaactct
ctgctgcacctggacctgagcaagaaccctgggttcctgtctggggaggatgcctcgaat
ctgtgcctgttcctgtcccagcctaattgtctggtccatttggacctgtctggcactgac
tgttctgttgactcgctatttggggctctgctgaggggttgttgtgccgatctctcctac
ttgaatctctccaaaaataccttctcccacaggaaagtgaaggagaacctgccgttgttc
tgtcagttcttcagctcggccttcagtctcacccatgtcagcctggcctctatgaagctg
ccccctgaggccctgaggtctcttttcatcggtctgaccacaaaccctcacatcaatgac
ctacacctggacattagtggctgtgagctgaaatctgcaggagcctctgtgatccaggag
ctgttccctaggctctcctccatcgccactctggacatctcagacaacgggctggatgca
gaccttctctcagttctaccagctctctccagacacacctccctaaagcacctgtatctg
ggcaagaacttcaacatcaagagcagggtgctggaggaaatcctacacaagctggtccaa
ctcatacaggaggaggaatgtgccctccagtccctctcactggctgactcgcggctgcgt
tctcggggcacagtgctggtaaacgctctgggcagcaacacctgtctgcgaaaggtggac
ctgagtgggaacagcctggaggacattggagccaagatgctgagcaaagccctacagatc
aacaccacactcaggagtgtgacgtgggatcgtaacaacacctcagctacaggattcctg
gatgtggctcgagcccttgaacataacttcaccttgcagtacatgcccctccccctcagt
gacatcagccaggcgtaccgtagtacctctgagaggacagagcaggcactgaccaagatc
cagcgtgctctgttgcggaacaaccagactcagcgcttctctcagagacaggctctacgg
ctgcaccagggcctggtcaccagcactgctgaacaggtgatggagcgtctgagtgtgtgt
gtgcagcagcaggtgtgtgtgctgcgtggagtaggggagatggaggagattcaagctgct
aaacaggtgctgaaggaggccagaaactcccgtgcgctgtacccctctctctgtgagcta
gctcatgtgctgtcagtagacgggccagtcagacagagactggaccaattggcaggggaa
ctgaccagagaagctgacaaggaactacaggtgattgttgattccatggtgtctctctgt
cgtgagttgtgcccgctgtcctcctctgctgcggagagattacgtcctcagctctcgtct
gtctcggagcacgtctccatccctcgctctgccatccgcacagccttgatggagagagca
gcacaggacattcaccgagcgctggaggaggtgaagctctcagtggtctcctatctcacc
aactccattgtggatcagatcttgcaggagctctacgccactcacaagactctgacgcgg
cgggtgtcccaggtgaagcgctgggaggtaacatgtgacggaggaacaggtctgaggtca
cacagacacagagactctctggacctcacagatgatgagatgggcaccagtatagtgagc
attgacacaattgccattaagaaacgtagctctagaactagacgtattcgacctgtctca
accaggctgagccagtgtgatgactccagctcctccacacccccctctgtgtcctcttct
ttctcttctttctcggccctctctcgctctacatcctgggaggggctgtctgagctccct
acccaaggtgcacctctccatcatgtgacgcgggttaggccgaggcccccacggaggcac
cgagcaggacatgccccctctgacacacattgcactgaaaatggagctgtcacccctatt
gatcatggactcccagatttctacaccaagagagtgctccctgatagtcagttgtcctct
cttcataaagcccactctctcagacgaaagaagagacgcaatatgctggccatctttggt
tttcgtaggaaccgcaactcaacgctctccaatcaggggccagattctggcggagacgga
tgtggggaagagtgtcgcactgtcgccatggcacccacagggacagccactgagaatgtc
tacacgctgctgcagccccctctttctgctgccagggcaggctctcctggtgaggggggg
gatgtggaggaccagagattggaggagccagtgggcctgagcctgcagccagtgcagagc
ataccaccacagcctggcatgccaggtagcagacaccccttctactcactgagccagcaa
tcagagctagaaaccgagcacgagcaacctgcagatatagacagacaggtggacaagcag
tggacagaggggaatcacacagtcagagagaggacattaataagaccggctgacagacag
gctgaacagcactggccagaggacaaactgtcagacaaaacatggacagagggaagaacg
gcagatagacagatggacagatattggacggagagcaggcatgcagatagacacatggaa
agacagtggacagttgacagacagtttgatcaagatggacagtggacagggagcagacaa
cagacagacagaacgtgggcagagggtcgaccaaaagacatacagatagacagacagtgg
atagacagcaggcagtcaggcagacagactgacagacaagaccagggacgacatctggct
cagagacctctgcccccttacccatcagacaggactccatcacctaaaagtgaaactgac
tctcagaaaaacctggacagacagaagtactctgacacacagacggacagacacctgcgc
tcagacactgctgtaggacaggtggaagggtggcgggatggaggaggggttccccctgga
cgggtttctacgagtgcatctaaaccagaccctccttcccagagcagcaaacccaatctg
tccaaactgagacagagacatctacaggagagctctgaggaggaagcaggcagagagagg
gatggtggaagaatggaaaggaaagagagagacagagatgcagagggacagcctcctccc
attcctgaaaagccaaagacatcatcctatgtgtcttttccaaacgagtatgccaatgaa
aggccgatcccgcctcctgcattcagaaaaccattgctgggattggcctacagggctgtc
agccaaggtgaggaagcagtgaggcctcaagcccccgtgaaaccccagaggaacagaaag
gccatgtcttgtgacacaggcactgacagggatagccctaataatcttgagaagccctca
aatcgcaaacccccggtgaaaaagcctagactaccccagaacagaaacaaatccttggac
tatcctgacagtgtcaacttagcgtctggtaacaacaagctgttgtga
DBGET
integrated database retrieval system
