Oncorhynchus tshawytscha (Chinook salmon): 112251170
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Entry
112251170 CDS
T05605
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C-like isoform X1
KO
K22038
volume-regulated anion channel
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112251170
Ion channels [BR:
otw04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
112251170
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_At5g56370
LRR_5
LRR_9
TEX29
Rota_NSP3
Motif
Other DBs
NCBI-GeneID:
112251170
NCBI-ProteinID:
XP_024277735
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Position
LG05:67380027..67409802
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AA seq
796 aa
AA seq
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MIPVTEFRQFSEQEPAFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVVQDKIICLPQRIS
MANQTIPNKTELVSPVVSQDVHEMMGLKTNLDLQQYSFINQMCYEKALHWYAKYFPYLVL
IHTLIFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGENPEEKVLLDNK
NNSASKAILNVSVEGNLDSLEKTQSLKSIPEKIVVDKPTASALDKKEGEQAKALFEKVKK
FRLHVEEGDILYVMYVRQTVLKVFKFLLIIAYNSALVSEVQITVKCSVDIQDMTGYKHFS
CNHTMAHLFSKLSYCYLCFVAVYGFTCLYTSYWLFYRSLKEYSFEYVRQETGIDDIPDVK
NDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTPEKLRQRLLTNHNNRLE
LQLFMLSGLPDTIFEVTELQSLKLEIINNVTIPASIAQLENLQELSLYQCCLKSHTTATS
FLKDNLKVLRVKFDDSRELPHWLYHLRNLEELYLIGSLSPDASKNVVLESLRELKNLKTL
SLKSNFTKIPQSIVDVSSHLQRLYVYNDGTKLVMLNNLKKMVNLTELELVHCDLERIPHA
VFSLTNLQELDLKENNLRSIEEIVSCQHLHKLTCLKLWHNSICYIPEHIKKLGSLERLYF
SHNKIEILPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDELFF
CKKLKTLKLGKNTLSLLSPKISYLVLLTHLELKGNHFELLPPELRFCRALKRGGLVVEDV
LFETLPSDIRDKMKAE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgacggagttccggcagttctcagagcaggagccagcattccgggttctg
aagccctggtgggatgtgttcacagactacctctctgtggtcatgttaatgatcggagtg
ttcggatgcaccctacaggtggtgcaggacaaaatcatctgccttccacagagaatatca
atggcgaaccaaacaataccaaataaaaccgagctggtctcacctgtagtgtcgcaggat
gtgcatgagatgatgggcctgaaaaccaacctggaccttcaacagtacagcttcataaac
cagatgtgctacgagaaagccctgcactggtatgccaagtacttcccttacctagtcctc
atacacaccctcatcttcatggtgtgtagcaatttctggttcaagttccccggctccagc
tctaagatagagcatttcatctccatcttgggaaagtgctttgactccccctggactact
agagctctgtctgaggtgtctggagagaacccagaggagaaggtattgttggacaacaag
aacaacagtgccagcaaagcgatcctcaacgtgtctgtagaggggaacctggacagcctg
gagaagacccagtccctcaaatccatcccagagaagatcgtagtggacaagcccacagcc
agcgctctggataagaaggaaggagaacaggccaaagctctatttgagaaggtgaagaag
ttccgcctgcatgtcgaagagggggacatcctctatgttatgtatgttcgccagactgtt
ctcaaagtgttcaagttcctcctcatcatcgcgtataacagtgctttagtctctgaggtg
cagatcacagtgaagtgcagtgtggacatacaggacatgacgggatataagcatttctcc
tgtaatcacaccatggcccacctgttctctaagttgtcgtactgttacctgtgcttcgtg
gctgtgtacggattcacctgcctctacacttcctattggctcttctaccgctcactgaag
gagtactcctttgaatatgtgcggcaagaaacgggaatcgatgacatcccagatgtgaag
aatgactttgccttcatgctgcacatgatcgaccagtacgacccactgtactccaaaagg
ttcgcagtgttcctgtctgaggtcagtgagaacaaactgaaacagctgaatctgaaccat
gagtggacaccagagaagctgcgtcagagactgctgaccaaccataacaacagactggag
ctgcagctcttcatgctgtctgggctcccagacaccatcttcgaggtgacagagctccaa
tccctgaagctagagatcatcaacaatgtaaccatcccagcctccatcgcccagctggaa
aacctccaggagctatctctgtatcagtgttgcttaaagagccacaccacagccacttcc
ttcctcaaggataaccttaaggtgctcagagtaaagtttgatgacagcagggaactgcct
cattggctgtaccatctgcggaatctagaggagctctatctcattggctcactgagtcct
gacgcttctaagaatgtggttctggagtctctaagggagctgaagaatctgaagaccctc
tcgctcaaaagtaactttacaaagattccccagtccatcgtagatgtgtccagccacctg
cagaggctgtacgtttacaacgatggcaccaagctggtgatgctcaacaacctgaagaag
atggtgaacctgactgaactggagctggtgcactgtgacctggaacgcatcccacatgct
gtctttagcctcacaaacctacaggagttggacttgaaggaaaacaacctgcgctccatt
gaggagatagtcagctgccagcacctccacaagctgacgtgcctgaaactctggcacaac
agtatctgctacatccctgagcacatcaagaagcttggcagcctggagcgcctctacttc
agtcacaacaagatagagatcttgccctcgcacctgttcttatgcaacaagcttcgttac
ctggacctgtccaacaacgacatccggttcattccgccggagatcggcgtcctacagagt
cttcagtatttctctgtcacgtgcaacaagatcgagaacctcccagacgagctcttcttt
tgcaagaagctcaaaacccttaagctgggcaagaatacgctgtctttgctctcaccaaag
atctcatacctggttctattgacacacctggaactgaagggcaaccattttgagctcctg
cctccagagctgcggttctgccgggcgttgaagcggggcggcctagtggtggaggacgtc
ctgtttgaaaccttgccttcggatatcagagacaaaatgaaggctgagtga
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