Oncorhynchus tshawytscha (Chinook salmon): 112251201
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Entry
112251201 CDS
T05605
Name
(RefSeq) oocyte zinc finger protein XlCOF6
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112251201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112251201
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112251201
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf_UBZ
Zn-ribbon_8
zf-C2H2_11
LIM
zf-C2HC_2
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
112251201
NCBI-ProteinID:
XP_024277801
LinkDB
All DBs
Position
LG19:44134988..44137220
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AA seq
544 aa
AA seq
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MENLINEHQSRNDPENKANNTDSPEIKIEIDEVRIEYTQQMNTVEEENLSDQPANQADSS
DLSQEDSESDSESFSCTQCDKSFRTALHLKKHQIRHTDKTLHYCITCEKSFPYASLLKQH
LTMHDADRTYCCTKCEKSFRSAPCLRKHLTTHGEKNHGCTECDRKFCSASRLKRHMTTHS
GERPHVCTACGKNFTRPESLKNHQLNHQGEKLHTCHDCGKSYSVLKFLKEHMKVHEGPHI
CSQCGKSYTLLYNLKMHMSAAHGEEKALPCSECGKSFVSEYRLRKHQKQVHRTAFPCPEC
GRSFSTLSILQEHQSNHTGIKPHSCEECGKSFGLLDGLQRHQYTHRPKPEKSCLCEECGK
SFLNLTQLARHKQVHSNVKSHTCEECGKKFKQIGGLRIHRRTHTGETPFSCKECSKTFTQ
ASSLKVHMLTHTGERSFSCKECGKTFNIAKTLRLHMRIHTGEKPHKCPDCGKGYHHAQGL
RMHLLFHKGERRHTCTYCDKSFFLPGHLRAHIRLHTGEKPYLCSNCGKSFNRAWNLKQHK
KICQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttgattaatgaacaccaaagccgcaatgatccagagaacaaggcaaataac
actgattcacctgaaataaagattgaaatagatgaggtgcgcattgagtacactcaacag
atgaacacagtggaagaagagaatctaagtgatcagccagcaaaccaagcagacagttct
gatttatcacaggaggattctgagtctgattcagagtctttctcttgtacacagtgtgac
aagagcttccgtaccgccttacatttgaaaaaacaccagattaggcacactgataaaacc
ctacactattgcataacttgtgagaagagcttcccttatgcatcgctcttaaagcagcac
ctaacaatgcatgatgctgacagaacatactgttgcacgaaatgcgaaaagagcttccga
tctgcaccgtgcctaaggaagcacctgacaacgcacggtgagaagaatcacggttgcacc
gagtgcgataggaaattctgttcagcatctcgcttaaaaaggcacatgacaacacatagc
ggggaaagaccacatgtttgcaccgcctgtgggaagaattttacccgaccagagagctta
aagaatcatcagctaaatcaccaaggggagaagctgcacacctgccacgactgtggaaag
agctacagtgtgctgaagttccttaaagaacatatgaaagtccatgagggtccccacatc
tgctctcagtgtgggaagagctacacactcctctacaacttgaaaatgcatatgtcagca
gcgcatggagaggaaaaagcattgccttgctctgaatgtgggaaaagttttgtttcagag
taccgtctgcgaaagcatcagaagcaagtacacagaacagccttcccctgccctgaatgt
gggcgaagcttctccacactgtccatattgcaagagcatcagtcaaaccatactggtatc
aaaccgcattcttgtgaggagtgtgggaagagctttggccttctggatggtcttcagagg
caccagtacacacacaggcccaaaccagaaaaatcctgcctctgtgaggagtgtggaaaa
agctttcttaacctcacccaactggccagacataaacaagttcattccaatgttaagtcc
cacacttgtgaggagtgtggtaaaaaattcaaacagatcggaggtttgagaatacaccgc
cgcactcacacaggggagacaccgttctcttgcaaagagtgcagtaaaacatttacgcag
gccagctccttgaaggttcatatgttaacccacacaggagagaggtcattctcttgtaag
gagtgtggcaagacattcaacatcgcaaagacattacggcttcatatgcgcattcacaca
ggagagaaaccacataaatgccctgattgtgggaagggataccatcacgctcaaggactc
agaatgcacctgctatttcacaagggggaacgacggcacacatgtacttactgtgacaag
agtttctttctgccaggacatttaagagcacacatccgactacacactggagagaaacct
tacctctgctctaattgtgggaagagtttcaatcgtgcttggaatttaaagcaacacaag
aaaatatgtcagtga
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