Oncorhynchus tshawytscha (Chinook salmon): 112251278
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Entry
112251278 CDS
T05605
Symbol
synj1
Name
(RefSeq) synaptojanin-1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00562
Inositol phosphate metabolism
otw01100
Metabolic pathways
otw04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
112251278 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
112251278 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112251278 (synj1)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
112251278 (synj1)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
112251278 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Motif
Other DBs
NCBI-GeneID:
112251278
NCBI-ProteinID:
XP_042167176
LinkDB
All DBs
Position
LG33:complement(46035726..46130231)
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AA seq
1716 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRNRDECLMFESGAVAVLSAAEKEAIKNTYTKMMDAY
GILGVLRLNLGDSMLHSLVVAAGCSSVGKVQDSEVFRVTSTEFVSLKNDPSDEDRIADVR
KVLNSGNFYFAWSSSGISMDLSLNAHRRIKEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGANDDGQVANFVETEQVIFLD
DQVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGYEANAPAFERHFSALRRLYGKQVIIN
LLGMKEGEHMLSKAFQSHLKASEHAGAVKMINFDYHQMVKGGKADKLHSVLKPQLNKFLD
ACSFFCYSGEKGVTKSQSGTLRTNCLDCLDRTNSVQAYFALEMLPKQLEDMGLTEKPQLV
ARFQEVFRSMWTVNGDSVSKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYASPRVLLGMCQNHQKYTRPKQIRVSVGTWNVN
GGKQFRSIAFRNQTLNDWLLDAPMKAGLPDFQDSRANPPDIFAIGFEEMVELNAGNIVSA
STTNQKLWAAELQKNISRDHKYVLLASEQLVGVCLFVFIRPHHAPYIRDVAVDTVKTGMG
GATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKERNDDYNEITRKLTFPMGRLLYSHD
YIFWCGDFNYRISQPNEEVKELIRQQNWEALTAGDQLVDQKNQGLVFRGFIEGNLDFAPT
YKYDLFSDDYDTSEKCRTPAWTDRCLWKRRKWNFDKTAEEMNMVGPVGEAEEQQQYPWSP
GELKYYGGELKTSDHRPVMAVMDIDVLEVDPDARHQVYKEVIALQGPPDGTILVSLCSSG
PDDYFDDALIDELLDKFAVFGEVILIRFVEEKMWVTFLEGYSALAALSLSASTVLGKVID
IRLKSSGWIKSLEEEMSVERICGSVPTSASSSLLAEDADMGEDDYDMEGDVDEEVEDILP
QHLQPGAGPGPLSSPSPSPRGSPSHSPTHGEPAAPSRPSRSAPRSAGPPQGTPVDFQPGA
PQALEPKRPPPPRPNAPPARPAPPQRPPPPSGGLSPMPGRRDMGGQKSPALARPASAMAR
RGSEGRVQSGPGGLPRPNMPQRAGVISVTPQARPAHPGAPRPTPEAPGAPRPTPDTHPGA
PRPGPDAQPKPTDLPLGPPPSGPPPVRHVPSPMQPTMQPQSASPAQPPMQPPMQPPMQAP
MQPPMQAQSATPAQPPMQAPMQPTMQPTMQPTMAAPMQPTMQAPMQPQSASPAQPPMQPP
MQPQSAPQAQPPMQAPMQPQMAAPMLPTQAGAGLGATGAVAPQGLSSPKPPPRSRSSHVL
PPETTTTENAPATQINGVNGIQREAQWKPEPFDTLTSDLSASWLNTQSLTRNSSLHSAPT
LPSSLHSTPLSTLQAFDNSSSSILPPSLTRSLLPPPPVPSRSRSQEALQRGSPNPFLSDP
VPARPNSTNPFTGPLVQQGQRRSLTPDFLAQQKASRPGLDRTMSAFTQPLSPTPAPFPAF
APNMTPGAPAPPPSLHRTMSLLGPSMTPLIPAPALPLLTAPSLPAPMLPLALPLSRPLLP
APALPLSPPSQGSTSSPNCFHLPQLLPPPPSLTQTQFSCSGFDSDPHWATGSTTLTSTFL
SRPPPIPARVVPGSSQPPLPARATNNLPFPKDFTER
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggatatcgcatctaccacaagttggacccgcccccgtacagcgtc
atcgtggaaaccaggaacagagacgaatgcctcatgttcgagtcgggcgccgtcgccgtg
ctatcggctgcagagaaggaggccattaagaacacctacaccaagatgatggacgcctat
gggattctgggagtcctacgcctcaacctgggtgattccatgctccacagcttggtagta
gcagcaggctgtagctccgtagggaaggtgcaagactctgaagtgttccgggtcacgtct
acagagtttgtttctctgaagaacgacccgagtgacgaggaccgcatcgctgacgtcagg
aaagtcctgaactctgggaatttttatttcgcttggtcctctagtggcatcagcatggac
ctcagcctcaatgctcaccgccggatcaaagaggacacgacagacaaccgcttcttctgg
aaccagtcccttcaccttcacctaaagcactacggtgtgaactgtgatgactggttgttg
aggttgatgtgcggcggggtggagatcaggacaatctacgcaggtcacaaacaggccaag
gcctgcgtcatctcccgcctcagctcagagagggccgggacgcgcttcaacgtccgaggg
gccaacgatgacggacaggtggccaacttcgtagagactgaacaagtgatcttcctggat
gaccaggtgtcttccttcatccagatccgtggttccattcctctgttctgggagcaacca
ggaatacaggtgggctctcatcgcgtcaagctctccagagggtacgaggccaatgcaccg
gcttttgagaggcactttagtgctctgaggaggctgtatgggaaacaggtgatcatcaac
ctgctaggcatgaaggagggagaacacatgctcagcaaagcattccagagtcacctgaag
gcgtccgaacacgccggagctgtgaagatgattaacttcgactaccatcagatggtgaaa
ggcggcaaagctgacaaactccacagtgtcctcaaacctcagctcaacaagtttctggat
gcctgtagcttcttctgctactctggagagaagggggttaccaagtctcagagtggtaca
ctcaggaccaactgtctagactgtctagacagaaccaacagtgtccaggcctacttcgct
ttggagatgttacctaaacagctagaggacatgggtctgacagagaagccccagctggta
gccaggtttcaggaagtgttcaggtccatgtggacggttaatggagactctgtcagcaag
atctacgctgggactggagccctggatggaaaggctaaggggggtaagttgaaggacggt
gctcgctctgtgaccagaaccatccagaataacttctttgacagttcaaagcaggaggcc
attgacatcctccgactgggctcaacactgaacagtgacctggcagacaaggcccgggcc
ctgctcaccacctccagtctttacgcctctcccagagttctactgggaatgtgtcagaac
caccagaaatacacccgtcccaaacagatcagggtgtcagtgggtacgtggaacgtcaac
ggaggaaaacagttccgcagcatcgccttccgcaaccagaccctcaacgattggctgctg
gacgctccgatgaaggccgggctcccagacttccaggacagtagagccaacccaccagat
atctttgccatcggctttgaggagatggtggagttgaatgctggcaacatcgtcagtgcc
agtacgaccaatcagaagctgtgggctgcagagctgcagaagaacatatcccgtgatcat
aaatacgtcctgctggcatcagagcagctagtgggagtctgtctgtttgtcttcatacgc
cctcaccacgccccctacatcagggacgttgccgtggataccgtgaagactgggatgggc
ggagccacaggtaacaaagggggagtggccatccgcatgctgttccatacgaccagtatc
tgtttcgtctgctcccacttcgctgccggccaatcacaggtcaaggagaggaacgacgac
tacaacgagatcacacgcaaactcaccttccccatgggtagactgctctactcccatgac
tacatcttctggtgcggggactttaactaccgcatcagtcagcccaacgaggaagtgaag
gagttaatcagacaacagaactgggaagccctgaccgccggggaccagctggtggaccag
aagaaccagggactggtgttccgggggttcatcgagggcaatttggactttgctcccacc
tataagtacgacctgttctctgatgactatgacaccagtgagaagtgtcgtacccccgcc
tggaccgaccgctgcctatggaagaggaggaagtggaacttcgacaagaccgcggaggag
atgaacatggtcggcccagtgggagaagcagaggaacagcagcagtacccctggagccct
ggggagctgaaatactacgggggtgagctcaagacctctgatcacaggcccgtgatggca
gtgatggatatagatgtcctggaggtggatccagatgcccgtcaccaggtgtataaggag
gtgatcgccctgcagggtcctcccgacggaaccatcctggtctccctctgttcctccgga
cctgacgactactttgacgacgcgctcatcgacgagctgctggacaagttcgctgtgttt
ggagaggtcatcctcatcaggtttgtagaggagaagatgtgggtgacgtttctagagggt
tattctgctctggctgccctgtctctgagcgcctccacggttctgggtaaggtgatagac
atccgtctgaagagttcaggttggattaagagtctggaggaggagatgagtgtagagagg
atctgtggatctgtccctacttccgccagctcctctctgctggccgaggacgctgatatg
ggagaggatgactacgatatggaaggtgatgtggatgaggaggtggaggatattctcccc
caacaccttcagcccggcgcaggccccgggcccctctcctccccctccccctccccacgg
ggcagcccctctcactcccccacccacggagaaccagctgcccccagcagacccagccga
tctgccccacgctctgctggaccaccgcaagggactccagtggatttccagcctggtgct
cctcaggccctggagcctaaacgcccccctcctcctcgccccaacgccccgccagcccga
cctgctcctcctcaacgccctcctcctccatcaggaggcctaagccccatgcccgggaga
agagacatgggaggacaaaaaagccctgcgctcgctagacctgcctcagcgatggccaga
aggggcagtgaaggtcgtgtccaatcaggtcctggaggcctgcccagaccgaacatgcct
cagagggctggggtgatcagtgtgaccccccaggcgcgtcctgcccacccaggtgctccc
agacccaccccagaggcaccgggggctccacggcccaccccagacactcaccctggagct
cccagacctggccctgacgcccagcctaaacccaccgacctgcccctgggcccccctcct
tccggaccccctccagtgagacatgtcccctccccgatgcagccaacaatgcagccccag
tctgcctctccagcccagcctcccatgcagccacccatgcagcctcccatgcaggcaccc
atgcagcctcccatgcaggcccagtctgccactccagcccagcctcccatgcaggctccc
atgcaaccaaccatgcaaccaaccatgcaaccaaccatggctgccccaatgcagccaacc
atgcaggctcccatgcagccccagtctgcctctccagcccagccacccatgcagcctccc
atgcagccccagtctgcccctcaagcccagccacccatgcaggctcccatgcagccccaa
atggctgctccaatgctgcccacacaggccggagcagggctaggggctaccggggctgtg
gccccccaggggctgtcctcccccaagccccctccccgctcccgttcctctcatgtcctg
ccccctgagaccaccactacagagaatgcccctgcaacccagatcaatggggtgaatgga
atccaaagagaagcacaatggaagcccgaaccctttgacacactcacctctgacctctcc
gcctcttggctcaacacccaatcactgaccaggaactcctccttacactcagctcctacc
ctcccttcatccctccactccacccctctgtccaccctgcaggccttcgacaactcctct
tcctccatcctccccccttccctcacccggtctctcctcccccctcccccggtcccatct
cgaagtaggtcccaggaggccctgcagcggggctctcccaaccccttcctgagtgatccg
gtcccagcccgtcccaacagcaccaaccccttcactggtcctctggtgcagcagggtcag
aggcgctccctgacacctgacttccttgcccagcagaaggcctcaaggcctggtctcgac
aggaccatgtctgccttcacccagcccctctcccctaccccagccccgttcccagctttt
gcccccaacatgacgccaggggcacctgcaccccctccatcgctccaccggacaatgtcc
ctgcttggcccatcgatgacccccctcatccctgctccagcgctccctctcctgactgct
ccctctctccctgcccctatgctccccctggctcttcctctctctcgccctcttcttcca
gcccctgccctccccctgtctcctccctcccaaggctccaccagcagccccaactgcttc
cacctcccccaactgcttccacctcccccatctctcacccagactcagttttcctgctct
ggtttcgactctgacccacactgggccactggctccaccaccttgacctccacattcctc
tcccggccccctccgatcccagccagggtggtcccaggcagcagccagcccccgctccca
gcccgagccacaaacaacctccctttccccaaggacttcactgagagatag
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integrated database retrieval system
