Oncorhynchus tshawytscha (Chinook salmon): 112251383
Help
Entry
112251383 CDS
T05605
Symbol
prrx1b
Name
(RefSeq) paired mesoderm homeobox protein 1b isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112251383 (prrx1b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112251383 (prrx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
112251383
NCBI-ProteinID:
XP_042178373
LinkDB
All DBs
Position
LG05:complement(79229147..79239784)
Genome browser
AA seq
245 aa
AA seq
DB search
MTSSYAHVRDRQATISNRLESPITSNLENLQAKKNFSVSHLLDLEEAREMVGTQADESVG
EAGRNMLESPGLTSGSDTTQQENEQLNAEEKKKRKQRRNRTTFNSSQLQALERVFERTHY
PDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQP
IVPRPAPRPNDYLSWGSASPYSAMATYPPTCSNPNTSQGMNMANSIANLRLKAKEYSLNH
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcacatgtaagggacaggcaagcaacgatatcaaatcgcttggag
agtccgattacatcgaatctggaaaaccttcaagccaaaaagaacttctccgtgagccac
ctgttggatctggaggaggccagggaaatggttgggacacaggcggacgagagtgtcggt
gaggcagggaggaatatgctggagtccccggggctgaccagtgggagcgacaccacccag
caggagaatgagcagctgaacgcagaggagaagaagaagaggaaacagaggaggaacaga
actacgttcaacagcagccagctgcaggctctggagagggtgtttgagaggacacactac
cccgacgccttcgtcagagaggacctggcacgcagggtcaacctcacagaggcacgggtg
caggtgtggtttcagaatagaagagcaaagtttcgtcggaacgagcgagccatgttggcc
agcaagaacgcctcgctccttaagtcctactccggggacgtcacggccgtcgagcagccc
atcgtaccccgtccggccccccgcccaaatgactacctatcctggggcagtgcctctcct
tacagtgccatggcaacctacccccccacatgctccaaccccaatacatcccagggaatg
aacatggctaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaaccac
gtgcccacggtcaactga
DBGET
integrated database retrieval system
