Oncorhynchus tshawytscha (Chinook salmon): 112251411
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Entry
112251411 CDS
T05605
Name
(RefSeq) protein spinster homolog 1-like isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112251411
Transporters [BR:
otw02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
112251411
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
PEMT
Motif
Other DBs
NCBI-GeneID:
112251411
NCBI-ProteinID:
XP_042177893
LinkDB
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Position
LG01:45945825..45962583
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AA seq
507 aa
AA seq
DB search
MSLADPTSDTTPFFSDDSEAEGSEEPGAGPSHHREVEEPASGVSSMRSVFTVIVLCFINL
LNYMDRFTVAGVLPDIEQYFGINDGKSGLLQTVFICSYMFLAPVFGYLGDRYNRKVIMSV
GIGFWSVVTLASSYMPREYFWLLLLTRGLVGVGEASYSTIAPTIIADLYVKERRTQMLSV
FYFAIPVGSGLGYIVGSKVDDMAGDWHWALRVTPALGLVAVVLLLFVVKEPKRGAIEARP
EHTLQRTSWLGDMKALCRNPSFVLSTFGFTAVAFVTGSLALWAPAFLFRAAVFTGERPPC
VKGPCDTSDSLYFGIITVVSGILGVASGAEVSRRLRLRTPKADPLVCALGLLLSAPFLYL
AIVFAQASPTATYVFIFLGETFLSMNWAIVADILLYVVVPTRRATAEAFQIVLSHLLGDA
GSPYLIGLVSDSLKQTDSYLWQFRSLQLSLLTCTFVAVGGGAFFLATALFIEKDRQRAAN
YTPSDDEPIVVPKSGRSTRVPVSSVLI
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagctgaccccacctctgacaccacgcccttcttctctgatgacagcgaggcg
gaaggctcagaagagcctggtgcggggcccagccaccaccgggaagtggaagagccagcc
agcggcgtgtccagcatgagatcggtgttcactgttattgtcctgtgtttcatcaacctg
ctcaactacatggacaggttcaccgtagctggtgttctgcctgacattgagcagtacttt
gggatcaatgatgggaagtcggggctgctacaaacagtcttcatctgcagctacatgttc
ctggctcctgtctttggttacctgggtgaccggtacaacaggaaggtgatcatgagtgtg
ggcatcggcttctggtccgtggtgacgcttgccagctcctacatgcccagagaatatttc
tggctcctgttgttgacgcgtggcctcgtgggggttggggaggccagttattccactatc
gccccaaccatcatcgctgacctgtacgtcaaggagaggaggactcagatgctctctgtc
ttctatttcgccattccagtgggcagtggtctgggctacatcgtggggtcaaaggttgat
gacatggcaggggactggcattgggccctgcgggtgactcctgcgttaggactggtagcg
gtggtgttgcttctgttcgtggtgaaagagccgaagaggggtgctatcgaggcccgaccg
gagcacaccctccaaaggaccagctggctgggtgacatgaaggccctttgcagaaacccc
agctttgtgttgtctacgtttggcttcacagcagtggcctttgtgactggctccttggca
ctctgggccccggccttcctcttcagagctgctgtcttcactggagaaaggcccccctgc
gttaaggggccctgcgacacctctgacagcctgtactttggcatcatcacagttgtgtcg
gggatcctgggtgtggccagtggtgcagaggtcagtaggaggctgaggttgaggacccca
aaggctgaccccctggtgtgtgctttaggactcctgctctcagcgcccttcctctacctc
gccatcgtcttcgctcaggccagccccactgccacctacgtgtttatcttcctgggcgag
accttcctgtctatgaactgggccattgtagcggacatcctgctatacgtggtggtcccc
acgcgtcgcgccacagctgaggccttccagatcgttctctctcacctgctaggagatgct
gggagtccttatctcataggcctggtgtcagactctctgaagcagactgactcgtacctg
tggcagttccgctccctgcagctctccctcctcacgtgcacttttgtggctgtggggggc
ggggctttcttcctggccaccgccctcttcatcgagaaggaccgtcaacgtgctgcaaac
tacacaccctcagatgatgaaccaattgttgtaccgaagagcggcaggtccacgagggtg
ccagtgtccagcgttttgatttga
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